Primulina tabacum: 142530190
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Entry
142530190 CDS
T11246
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3-like
KO
K03255
protein TIF31
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptab03012
]
142530190
Translation factors [BR:
ptab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
142530190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
TPR_2
CLU_N
TPR_MalT
TPR_9
TPR_8
PAM2
TPR_1
TPR_16
TPR_4
Motif
Other DBs
NCBI-GeneID:
142530190
NCBI-ProteinID:
XP_075492104
LinkDB
All DBs
Position
16:1890622..1903863
Genome browser
AA seq
1675 aa
AA seq
DB search
MAPKSSRSKGNKAKSERKKKEEKVVPSVLDVCVITPYETQVVLKGISTDKILDVKKLLAV
NVETCHLTNYSLSHEVKGQKLSEKLEVTSLKPCLLRMVEEDYSDESLAVSHVRRILDIVA
CTTRFGKPKGGGSESRSKKNKIQQSAAVARTRNGELQSPEITPLAISECHDMLAIQPIPK
LSDFYEFFSFSHLSPPILHLKRVECNGEMRRDGDYFAVQIKICNGRTIQVMANVKGFYTL
GKQVLHSHSLVDLLQQQSQAFANAYASLIKAFIEHNKFGNLPCGFRANTWLAPPSIVDSA
PNFIPLPREDENWGGNGGGQGRCGVYDSRQWATDFAILASLPCKTEEERVVRDRKAFLVH
NLFLDVAIFQAASSIQKVMDSTANDTANFLPGSVVHESRVGDLYIMVKRDDAVANLKREL
KIFGSKTSNDSAEEISRQNLLKGITADESVVVRDTSSLGTVVVRQSGYTATVEVVGNAKR
GKSLIQDVLVEDQEDGGSNALNINSLRVMLNEACTESSVRGPTLRPDLMDVGSSRCLVQK
VMKDSMRKLEDSPAVTRSFIRWELGSCWVQHLQKQETPADKSSGGHKGENEVIKGLGKQF
KMLAKKEKKAPAPSLKDEEHCAGSSSLEMEIKMGESKIFESAPELLKYVPEEAISRLKEN
GVCLHTKSVDELVKMAHGYYDDVALPKLVADFASLELSPVDGHTLTDFMHLRGLQMRSLG
RVVELAEKLPHIQSLCIHEMVTRAFKHLLQAVIASVQSMDSMSTSIATALNFLLGSSQSK
NDDVQDQALKLTWLHVFLKKKFGWELKDEFRHLRKLSVLRGLCHKVGLELVPKDYDMDSS
TPFKKSDVISLVPVCKHVVCSSADGRTLLESSKVALDKGKLEDAVKYGTKALAKMIAVCG
PYHRTTASAYSLLAVVLYHTGDFDQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYY
RLQHIELALKYVNRALYLLHFTCGLSHPNTAATYINMAMMEEGMGNVHVALRYLHEALKC
NQRLLGADHIQTAASYHAIAIAFSLMEAYSLSVQHEQTTLQILRAKMGAEDLRTQDAAAW
LEYFESKALEQQEAARNGTPKPDASIASKGHLSVSDLLNYISPDQEPKSADAQRKRRSKV
FPVAEKSHLEQQGGKDENAVRNECVEISVTTEESSSEEEKSDTNSSQAPLFIAEDIFVSP
FSEEGIQELNLEAWQEANSKSRPSNGAGRKFNRKRPDLAKIKTDNSRDGCYLKEVTSLGG
KGTFKTVPAEVTPLKQATLYTTDGSSKAQAKILMSRSPASVTKASPVPATLIASKSLSYK
EVAVAAPGTVLKPLLEKVEELSDEKSGNQFSTSPKETAQQDVRAGVFVEDSLPDPKNAEG
DSEGEVLEARSELANSCSDAEDISYPGNQENSVETNGTKLSASAEPFSPGSYSLTHSLKS
TSAISVYDLVASQGPLAEPMGFQSVAVRIPCGPRSPMYRRASHAFWVRHGFPNHQIPVSE
LNGFTMNPNAPAFVPRGAWQMNATAKDSEPSNNTNSYDKKVHSGSGGENLVEEVTERTKK
NGSDAVKAELARQVLISFMINSVQNSSDPTSITPISDKKYEYSSDSAEAIANDSAIIKIF
DGNDRKTHQMQDVNMNKTRDSEGFTLVTKRKKNRQQLPNGVHGLHSRQSLCASVR
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcacctaagtcgagtaggagcaaaggaaataaggctaaatcagaaaggaaaaagaaa
gaagagaaagttgtgccaagtgttcttgatgtctgtgtaatcaccccatacgagactcaa
gttgtgctcaagggtatctcgacagacaagattcttgatgtgaagaagctgttggcagtt
aacgttgaaacatgccaccttacaaactattctctttcccacgaggtgaaaggacagaaa
ttgagtgaaaaactagaagtcaccagcctgaagccatgtttgctgagaatggttgaagag
gactactccgatgagtcgctcgctgtatctcacgtccggaggattttggacatcgtcgcc
tgcacgacgcgattcggaaaacctaagggaggtgggtcggaatctcgatcgaagaagaac
aaaatccaacagagcgccgccgtggcacggacacgcaatggagagttgcagtcaccggag
attacgcctctggcgatatcggaatgtcacgatatgttggcgatccagcctattccaaag
ctctcggatttctacgaattcttctcgttctctcacctatctcctcctatacttcatttg
aaaagagtggaatgtaatggagaaatgcggcgagatggtgactacttcgcagtacagata
aaaatatgcaatgggaggacaatacaagtgatggcaaatgtgaaagggttctacacttta
ggcaaacaagttttgcacagccattctttggtggatcttctgcaacaacaaagccaagct
tttgccaatgcatatgcatccttgataaaagctttcatcgagcacaataagttcggtaac
ctaccatgtggtttccgtgccaatacgtggcttgctcctccgtctattgttgattctgca
ccgaacttcataccccttcctagagaggatgagaattggggaggaaatggtggaggccag
ggaagatgcggcgtgtatgatagtagacagtgggctacagattttgcaatattggctagc
cttccttgtaaaactgaagaagagagagtggttcgagatagaaaagcatttttggttcat
aatctttttctagatgtcgccatctttcaagcggcttcatccatacaaaaagtgatggat
tccactgctaacgacactgcaaattttcttcctggttcagttgtgcatgagagtcgcgtt
ggagacctttatattatggtgaaaagggatgatgcggtcgcaaacttgaaaagggaatta
aagatatttggttctaaaacctctaatgattctgctgaagaaatttctcgacaaaatcta
cttaaaggaataactgcagatgaaagtgtagtagtacgtgatacttcttccttgggtaca
gtagttgtgaggcagtccggctacactgcaacagttgaggtagttggaaatgctaaaagg
ggaaagagccttattcaagatgttctagttgaggatcaagaagatggggggtccaatgcg
cttaacattaatagtttaagagtaatgcttaatgaggcatgtactgaatcatctgtcaga
ggcccaactctcaggcctgatttgatggatgttggctcttcaagatgtctggtccaaaaa
gtaatgaaggatagtatgagaaagctcgaagatagtcctgctgtgacaagaagtttcatc
agatgggaacttggttcttgttgggtacagcatctacaaaagcaggaaacaccagcagat
aaaagctctggtggtcacaagggagagaatgaagtaatcaaaggactcgggaaacaattt
aaaatgctagcgaagaaggaaaagaaagcaccagctcctagcctaaaggatgaagagcat
tgtgctggatccagcagcctagaaatggaaattaagatgggggagtcaaagatctttgag
tctgcacctgagttgctgaaatatgttccagaagaggccatttcacgtttgaaagaaaat
ggggtctgtcttcataccaagtcagtggatgagctggtcaagatggcacatggatattat
gacgatgttgcgctgcctaagctggtcgcagactttgcatcattggaactttctccagta
gatgggcatacattgaccgacttcatgcatcttagagggctacaaatgcgttctttaggt
cgtgtggttgaacttgctgagaagcttcctcatatacagtctctttgtattcatgagatg
gttacccgagcctttaaacatttgcttcaagctgtaattgcttctgttcagagcatggat
agcatgtccacttcaatagccacagccttaaacttcttgctagggtcttcccaatccaaa
aatgatgacgtgcaagatcaagcgctcaaattaacatggctgcatgtatttctaaagaaa
aaatttggttgggaactaaaagatgaattccgacatttgagaaagttatctgtactcaga
ggactttgtcataaggttgggttagagttggttcctaaagactatgatatggacagctcc
actccatttaagaaatctgatgtcatcagcttggtaccagtctgcaagcatgtagtatgc
tcttctgctgatgggcgaactcttttggagtcctccaaggttgcacttgacaaagggaag
ctagaagatgctgttaaatatggaacaaaggctctggcaaagatgattgctgtttgtggt
ccatatcatcgaacaactgcaagtgcttacagtcttctagctgttgttttataccacact
ggagattttgatcaggcaaccatatatcagcaaaaggcgttagatatcaatgagagggag
cttgggcttgatcatcctgatacaatgaaaagctatggagatttatcagtgttttattac
cgtcttcaacacattgagttggctttaaaatatgtgaaccgtgcactgtaccttcttcat
tttacatgtggactctctcatcctaatacggccgctacatacataaatatggctatgatg
gaagagggtatgggcaatgttcatgtcgctctcagatatctgcatgaagccctcaaatgc
aatcaaagattattaggtgcagatcacatacagactgctgccagctatcatgcgatagcc
attgcattttcattgatggaagcatattccctgagcgtgcagcatgaacaaactacattg
caaattctgcgggctaaaatgggagcagaggatctccggactcaggatgctgctgcatgg
ctagaatattttgaatcaaaagccttggaacagcaagaagcagcacgtaatggaactccc
aaaccagatgcatctattgccagcaaaggccatctgagtgtgtcagatctcctaaattat
ataagtccagatcaggagccaaaatcagctgatgctcagaggaaacggcgttcaaaggtt
tttccagttgctgaaaaatcccatctagagcagcaagggggaaaagatgaaaatgccgtc
aggaatgaatgtgtagaaatcagtgtaacaaccgaagaaagtagcagtgaagaggaaaag
tcagataccaactcctcccaagcaccattatttatcgccgaagatattttcgtgagtcca
ttttcagaagaaggcattcaagaattgaatttagaagcgtggcaggaagccaattcgaaa
tcacggcccagtaatggagctggtagaaagtttaacagaaagcgtccagatcttgccaag
ataaagacagataattctagagatggctgttatttaaaggaggttacttcactggggggt
aaggggacattcaagacagttcctgctgaagtgactcccctgaagcaagctaccttatat
acgactgatggttcaagtaaagcgcaggcaaaaattttgatgtccagaagtcctgcatca
gtaactaaagcttctccagttcctgccactctcatagcatcaaaatcattgtcatacaaa
gaagtagccgtggcagcaccaggtacggttctaaagcccttactggagaaagtagaagaa
ttaagtgacgaaaaatctggcaatcagttctccacaagtccaaaagagacagcacaacag
gatgtgagggcaggagtttttgtagaagactcattgccagatcccaagaatgctgaaggg
gacagtgaaggtgaagttcttgaagctagatccgagttggcaaactcttgttcggatgct
gaagatatttcatatcccggcaaccaggagaattctgtagaaacaaatggaaccaagctt
tcggcttctgccgaaccattcagtccaggttcctactctttgacgcattcattaaaatcc
acttctgccataagtgtctatgacttagtggccagccaaggtccactcgcagagccaatg
gggtttcaatcagttgctgttagaattccttgtggtccaagatcgcccatgtatcgtaga
gcaagccatgctttctgggtcagacatggattcccaaatcaccaaatcccagtttctgaa
ttaaatggctttaccatgaatccaaatgcacctgcatttgttcctagaggtgcgtggcaa
atgaatgcaaccgctaaagattcagaacctagcaacaacaccaattcatacgacaaaaag
gtgcattcaggttctggaggagagaatctcgttgaagaagtaactgaaaggaccaagaaa
aacgggtctgatgcagtgaaggcggagttagcaagacaggttcttataagtttcatgata
aattcagtacagaattcttctgaccccactagcatcactcctattagtgacaagaagtat
gaatattctagtgattctgctgaagcaattgcaaatgacagtgcaatcataaagatcttt
gatggtaatgatagaaaaactcatcaaatgcaagatgtaaacatgaacaagacaagagac
agcgaaggatttacgcttgtcacaaaacgcaaaaaaaaccggcagcaactcccaaatggt
gtgcatggcttgcacagtcgacaatccttatgtgcgtctgtgaggtga
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