Primulina tabacum: 142530332
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Entry
142530332 CDS
T11246
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142530332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142530332
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
SR proteins
142530332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
142530332
NCBI-ProteinID:
XP_075492234
LinkDB
All DBs
Position
17:complement(23445329..23451110)
Genome browser
AA seq
366 aa
AA seq
DB search
MSRSSRSDRTLYVGNLPGDIREREVEDLFYKYGSVVHIELKVPPRPPGYAFVEFEDVRDA
EDAIRGRDGYDFDGHRLRVELAHGGRGNSSTDRHSSHSSSRGPRGGVSRRSDYRVLISGL
PHSASWQDLKDHMRRAGDVCFSQVFNEGSGKTGIADYTNYDDMKYAIKKLDDTEFRNAFS
RARIHVKEYDSTRSRSRSRSPSYLKGKSNGRGRSASLSSSRSKSKSPKRKASHRSRSRSK
SVSSRSRSGSKAHPVSRSPSRSRSPKPSVSLSSSPVIVCLFVFLGYLCSWNVIKRLVLFY
HCILVFAFSCLFLTSFSSRNMQVRVQKDAVQAEAKARAPARVVAGVILAGERLADPMNLD
AVILIH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctccagtagaagtgaccgaactctctatgttggtaaccttcctggtgacatt
cgcgagcgagaagtggaagatttattttacaagtatggatctgttgtgcatatcgaattg
aaggttcctccaaggcctcctggctatgcctttgttgagttcgaagatgttcgtgatgct
gaagatgccattcgaggacgtgatggctatgattttgatggacatcgcctacgggttgaa
cttgcgcatggtggccgtgggaactcatcaacagatcgtcatagtagccatagcagtagt
aggggtcctcgtggtggagtttccaggcgatctgactacagagttttgatatctggactg
ccccattctgcatcatggcaagacctcaaagatcacatgcgtcgagctggtgatgtttgc
ttttcccaagttttcaatgagggaagcggaaaaacggggatagcagactatacaaattac
gatgacatgaaatatgccatcaagaaacttgatgacactgaatttcggaatgccttttct
agggcaagaattcatgtaaaggaatatgattctactcgttccagaagccgcagccgcagc
ccttcttacttgaaaggaaagagcaacggtcgcggccggagtgctagtctgagcagcagc
aggagtaaaagcaagtcaccaaaaagaaaagcatcacaccgctcaagaagccgttcaaag
tcagtctcttctcgatctcgttctggttcgaaagcacaccctgtgtcaagatctccatca
agatccagatctccaaaaccatctgtgagtttatcctcgagtccggttattgtttgtctg
tttgtcttccttggttatctttgcagttggaatgttattaagcgcttggtacttttctac
cactgcattcttgtatttgctttttcctgtttgtttctgacaagtttcagcagcagaaac
atgcaagtaagagtccaaaaggacgcagtccaagcagaagccaaagcaagagccccagcc
agagtcgtagcaggagtcattctagcaggtgaaagattggccgatccgatgaaccttgat
gccgttattttgatccattaa
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integrated database retrieval system
