Primulina tabacum: 142530388
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Entry
142530388 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142530388 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142530388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142530388
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142530388
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142530388
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142530388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
ATG16
Motif
Other DBs
NCBI-GeneID:
142530388
NCBI-ProteinID:
XP_075492326
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All DBs
Position
17:complement(33513162..33526405)
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AA seq
506 aa
AA seq
DB search
MLPNFNGNPKPTMLQNFNGNPNNGNNASAPQQVIGNPGSFCPNPMQIRPQFQMGVLNPQL
AMPPFTNPNAYFAPTQLFPFPPGHAQNFSCSSLNPIFAHNAVNSPQLLHNGQFNVPNLVQ
NVNQLLQMQIASCRPQNFTSAPSNMMNGNENVLQLMNGNASKQMHGNVNAAKDFGTPQHQ
QNLHINSPRAAKLQSNAGEFHGANNNWKRSNKKNLSGNFKGDASQRGFVKQRFHHKQYSK
GNSKFHNENQGKGSKNGANTSILSDTGKQIQVEKGRPLTLNYTEQEIQQWREQRKKNYPS
KANMEKKLKDNSMRLEVTDAVAKIRRQELKEILEKQAELGCEVAEIPSCYLPDSERQTDG
RVKDQHVFGKRERFPNKFDRQGKFHQNFHDRNDCFAKKQRLASDSTHLDNKREPSLLQKL
LYSDIKRDATYLLQTFRFMVMNSFFADWPSKSLRFPVVVIKESGDESGSSEKKNQVAVDD
VSASPGRDFVIKNVGQSLQEEGEITV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaaacttcaacggcaaccctaaacccaccatgctccaaaacttcaacggcaac
cctaacaatggcaacaatgcttccgcgccccaacaggttatcggaaacccaggaagtttt
tgtcctaatcctatgcaaattcggcctcaattccaaatgggggtgctcaacccacaactt
gctatgccacctttcaccaacccaaacgcctactttgctcctacccagcttttccccttc
ccaccgggccatgcacagaacttcagttgtagcagtttgaatcccatctttgcccataat
gccgtcaactccccccagctcttgcacaatgggcagttcaatgtgcccaatttagtacaa
aatgtgaaccagcttttgcaaatgcaaattgccagttgccgtccacaaaacttcactagt
gcaccgtcaaatatgatgaatggaaatgaaaacgtgctgcagttgatgaatgggaacgcc
tcaaaacaaatgcacggcaatgttaatgctgcaaaggattttggtacccctcaacatcaa
cagaatctgcatatcaattctcctcgtgctgcaaaattacagagtaatgcaggcgagttc
catggggccaacaataactggaaaagatcaaacaagaagaaccttagtggtaattttaaa
ggtgatgcatcacagagaggatttgtgaagcagaggtttcatcacaagcaatattccaaa
ggaaattccaaatttcataatgaaaatcaaggaaaagggtcgaaaaatggagcaaacacc
tctattctttctgatacgggcaaacagattcaagtggaaaaagggaggcctctcacgttg
aactacacagaacaagaaattcaacagtggcgtgaacagcgtaagaaaaattacccgtca
aaagctaacatggagaagaagttgaaagacaattctatgcggcttgaggtcacagatgca
gttgccaagatacggcgtcaggaactcaaggagatattggagaagcaagctgaattaggt
tgtgaagttgcagaaataccatcatgttatttaccagattctgaaagacagacggatggc
agggttaaagaccaacacgtattcgggaagagggagagatttccaaacaagtttgataga
cagggcaaattccatcaaaattttcatgatcgaaatgattgctttgctaagaaacaaaga
ttggcaagtgacagcacccatttggataataaaagggagccatctctattgcagaaactg
ctatattcggatattaaaagagacgcaacatatttgctgcaaacttttcggttcatggtg
atgaattcattcttcgcggattggcctagcaagtctctgagatttcccgtggtcgttatc
aaagaatcaggtgatgaaagtggcagttcggaaaagaagaatcaggtggcggtagacgat
gtttctgcttctcctggaagggattttgtaataaaaaatgtaggtcaaagtcttcaagaa
gagggagaaattaccgtctga
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