Primulina tabacum: 142530941
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Entry
142530941 CDS
T11246
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ptab Primulina tabacum
Pathway
ptab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142530941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptab04040
]
142530941
Ion channels [BR:
ptab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142530941
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
142530941
NCBI-ProteinID:
XP_075492993
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Position
17:12547306..12552439
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AA seq
713 aa
AA seq
DB search
MNNHQEKFVRFQDWRSEKIYNGHSQSESGVPEGRLRVAVSSVSDRFRRGLESGSDRIKRF
TGSLRSFSLRKFLADDEGSRKKILDPQGSFLQKWNKIFVLSCVLAISLDPLFFYIPIIDD
EKKCLDLDPKLELTASILRSFTDVFYLIHILFQFHTGFIAPSSRVFGRGVLVEDSWEIAK
RYLSSYFIIDILAVLPLPQVVIWFVIPKLSGAKSFNTKNLLQYVVFLQYIPRILRVYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIGRETTCWRKACGNQTACRH
AAFYCMGDHTQFSTMLNNSCPIQNPNTTAFDFGIFLDALQSGVVESKDFPQKFFYCFWWG
LQNLSSLGQNLKTSTFVWESCFAVAISISGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRR
DAEQWMSHRLLPDSLRGRIRRYEQYRWQETRGVEEEILVHNLPKDLRRDIKRHLCLDLLK
RVPMFEKMDDQLLDALCDRLKPVLYTEDSYIVREGDPVDEMLFIMRGKLLTVTTNGGRTG
FFNSDYLKAGDFCGEELLTWALDPNSSSNLPISTRTVQALSEVEAFALKADDLKFVASQF
RRLHSKQLRHTFRFYSQQWRTWAACFVQAAWRRYSRKKLEESLREEENRLQDALAKGGGS
SPSLGATIYASRFAANVLRALRRNGTRKTRMAERISPMLLQKPAEPDFTAEDK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaccaagaaaagtttgtgaggtttcaagattggagatctgagaaaatctac
aatgggcattctcaatctgaaagtggagtaccagagggtagacttagagtagcagtgtca
tcagtttcagacagatttcggaggggtttagaatctggttctgatagaatcaaaaggttc
acaggatccttgagatccttctcactgagaaagtttctggcggatgacgagggatctcgg
aagaaaattcttgatccacaagggtcattccttcagaaatggaataagatatttgtatta
tcatgcgtgcttgccatttcgttggaccccttgtttttctatattcccattatcgatgat
gaaaagaagtgccttgatttggacccaaaattggagctcacagccagtattctacgatcc
tttacggatgtgttttacctcatccatattctatttcaatttcacacaggttttattgcc
ccatcttctcgtgtatttggcagaggggttttagttgaagattcttgggagatagcaaag
agatatctgtcatcatacttcataattgacatccttgcagttcttccacttcctcaggtt
gtaatctggtttgtcattcccaaactgagtggtgcaaaatctttcaacacaaagaatttg
ttacaatacgtggttttcttacaatatataccaaggattctccgtgtttatcctttgtat
aaagaagtcactagaacttctggtatactcactgaaacagcatgggctggggctgccttc
aatctttttctttacatgcttgccagtcatgtgcttggagccttttggtatttgttttcg
ataggacgtgaaactacttgctggcgaaaagcctgtggtaatcagactgcttgtcgacat
gccgcattttattgcatgggtgatcacacacaattcagcactatgttgaacaattcgtgc
cctattcagaatcccaatacaactgcttttgactttggaatatttctcgatgcccttcaa
tctggtgttgttgaatcaaaagattttcctcagaaattcttttactgtttctggtggggg
ttgcagaatttaagttcccttggccaaaaccttaaaacaagcacctttgtttgggaaagt
tgctttgcagttgctatttctatatccggcttggtgctgttctcgtttctgattggaaat
atgcagacgtatctgcagtccacaactttaagattagaggagatgagggttaaaagacga
gatgcagagcaatggatgtctcaccggttgctccctgatagtttgaggggtagaatcagg
aggtacgagcaatacagatggcaggaaactagaggtgttgaagaagaaattctggttcat
aatcttcccaaggatctacgaagagatatcaaacggcatctctgtttggatttattgaaa
agagtgccaatgtttgagaaaatggatgatcaactccttgatgcattgtgcgaccgtctc
aaaccagtgctttacactgaggacagctacatagtacgagaaggggatccagtggatgaa
atgctgtttataatgcgtggaaaattgttgactgtaacgacaaatggaggaaggaccggg
ttttttaactcagattacctaaaagcaggtgatttttgtggggaagagctccttacttgg
gcactggatcctaactcatcatctaacctccctatctcgactagaactgtccaagctcta
tcagaagttgaagcattcgcgttgaaggctgatgatttgaagtttgtagcatctcaattc
cgacgactacacagtaaacagctacgccatacttttaggttttactcgcagcagtggagg
acttgggcagcttgcttcgtacaagcagcatggcggcgctatagtaggaagaagctagaa
gagtctctacgagaagaagaaaaccgattgcaggatgcattggcgaaaggtgggggaagt
tcaccgagtttaggggcaaccatctatgcctcgagatttgctgcaaatgtacttcgtgca
ttgcgacgaaacggtactagaaagacaagaatggcggaaaggatatcacctatgctactt
cagaagcctgccgagccagactttacagctgaagacaaatga
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