Primulina tabacum: 142531234
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Entry
142531234 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142531234
KO
K12874
intron-binding protein aquarius
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142531234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142531234
Spliceosome [BR:
ptab03041
]
Complex B
Other components
Prp19-related factors
142531234
Complex C
142531234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD-helicase
UvrD_C_2
AAA_22
AAA
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
142531234
NCBI-ProteinID:
XP_075493440
LinkDB
All DBs
Position
17:complement(25186608..25206511)
Genome browser
AA seq
1553 aa
AA seq
DB search
MTKIYGTGVYDFRRHRVAEYPETVDVSQPHESNKGPNLSGSITFSEIQRDRLTKIAAANW
AVNADSGLKKPFSGELVKEIYYSELKVKGGRMPVPLQRVMVLEVSQYLENYLWPNFDPET
ASFEHVMSMILMVNEKFRENMAAWICFYNRKEMFKAFIERVLRLKEGRVLTVAEKTNYLL
FMINAFQSLEDEIVSEKIMRLASLECWHSLSYGRFQMELCLNESLIKKWRRIAKRAKDAA
KRGEPFDPTTMVEARFLRNLIEEFLEVLVSEVFPTKQRNDKDNELVDITGMNEGDGASIL
YCERFMEFLIDLLSQLPTRRLVRPLVADVAVVSKCHLSTLYKHEQGKLFAQLVDLLQYYE
GFEIDDQKGRQMTDDEVLQAHYKRLQAFQVFAFKKIPKLRELALANIGAIDRRANLAKKL
SVLSPEELRDLVCGKLKLISKDDPWSERVDFLIEVMVSFFEKHQSQREAINALPLYPNEQ
IMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPH
LLACINNEGETAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVTAEVTFSISSYKAQIR
SEWNALKEHDVLFLLSIRPSFTPLSAEEAANASVLQRLGLQYVRGCEIVEIRDEERTLMN
DFTGRIKRDEWKPPKGELRTVTIALDTAQYHMDVSDMAEKGIEDVYGTFNILMRRKPKEN
NFKAILESIRDLMNESCIVPDWLHDIFLGYGNPSAAKWTNMPDLLEVVDFKDTFLDAVHV
KDSFPNYQVCFTNSDGSMSMQPCPPFRIKFPKNFNGNLNSLSGNEIAKVSSTDSAASADA
DSDKEKLLVETYIPPDPGPYPQDQPKQNFVRFTPTQIEAIISGIQPGLSMVVGPPGTGKT
DTAVQVLNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATDL
DFSRQGRVNAMLVRRLELLSEVERLARSLQLPEDVAYTCETAGYFWLLHVYSRWELFLAA
CVENQDKPSFVQDRFPFKEFFNDSPRPIFTGQSYEKDMHAAKGCFRHLQTMFQELEECRA
FELLKSTVDRSNYLMTKQAKIVAMTCTHAALKRKDFLHLGFKYDNLVMEESAQILEIETF
IPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIEL
NAQGRARPSLARLYNWRYKDLGDLQFVRENTIFHRANAGFCYDYQLVDVPDYRGRGETAP
SPWFYQNEGEAEYIVSVYMYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPLDFIGP
PHKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRLLFEQC
YELQPTFQLLLQRPDLLALNLSEVGAFTDRHVEETGPAQLVGGIEEMANIVNYKIHHVYQ
ERLMSHQLNQFPANPPEQDFVDINAQEENGLLDSEVSMRSMDIDIHGLANGAEKDILPDG
NSNDVSSPETYAKQDGNKQIQNDLNIEADVDMQENDINGGALESNLGENMMDK
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagatttacggtacgggggtgtacgatttccggcgccaccgggtggccgagtac
ccggagactgtggacgtctcgcagccgcacgagtccaacaagggacccaacttgtctggt
tccattactttcagtgagattcaaagggaccgtttaaccaaaatagcggctgccaattgg
gcggtaaacgcggactcaggcctcaagaagcccttcagcggagagcttgtcaaagaaatt
tactattccgagttaaaagtcaaaggcggtagaatgccagtaccactgcagagagttatg
gtattagaagtgagtcaatacttggagaattatctgtggccaaactttgatcctgagact
gcttcttttgagcatgtgatgtcaatgatacttatggtcaatgagaagtttcgagaaaat
atggctgcttggatatgcttctataataggaaggaaatgtttaaagcattcattgagagg
gtacttcggttgaaagagggaagagtcctaactgttgcagagaagacaaattatctactt
tttatgataaatgcctttcagagtcttgaagatgaaattgtaagtgaaaagattatgaga
ttagcgagtcttgagtgctggcatagcctttcatatggccgttttcagatggaactttgt
cttaatgaatctttaatcaagaaatggagaagaattgcaaagcgggcaaaggatgcagct
aaacgaggggaaccttttgatcccacaacaatggtagaagcaagattcttgcgtaacctc
attgaggagtttctagaagtacttgtttctgaggtttttcctactaaacagcgaaatgac
aaggataacgagctggttgatataactgggatgaatgaaggggatggcgccagtatttta
tattgtgagagatttatggagttccttattgatctgttgagccaactaccaactaggaga
ttagtcaggccacttgttgctgacgttgctgtggtctctaaatgccatttaagtactttg
tataaacatgaacaagggaagctctttgcgcagttggttgacttactacagtactatgaa
ggttttgagattgatgatcaaaaaggtagacaaatgactgacgatgaagtccttcaagct
cattataagcgccttcaggctttccaagtttttgcatttaaaaagattccaaagttgcga
gaacttgcattggccaacatcggtgctattgataggcgtgcgaacctggcaaaaaagctc
tcagtactttctcctgaagagctaagagatttagtctgtggtaagctcaagttgatatct
aaggatgatccatggtcagaaagagttgacttcctgatagaagtcatggtttcgttcttt
gagaaacatcagtctcagcgagaggcgataaatgctcttccactatatccgaatgaacaa
ataatgtgggatgaaagtcttgtgccaagcatcaactactctggggaaggctgtttggca
cttccaaagctgaatttgcagtttttaactcttcatgattaccttcttagaaatttcaac
ctctttcgccttgaatcaacttatgaaatccgtgaggatattcaagaggctgtcccacac
cttcttgcttgcattaataatgaaggagagactgcttttcgtggttggtcaagaatggcc
gtacctattaaagaatttaagataactgaggtcaaacaaccaaacattggggaagttaag
ccatcggcggttacagctgaagttactttcagcatttccagctataaagcacagataaga
tcagaatggaatgcgctcaaggagcatgatgttctatttttgctgtccattcgcccttca
tttacacctctaagtgctgaggaagcagccaatgcatctgttttgcagaggcttggtctt
cagtatgtgcgtggatgtgaaattgttgaaatacgtgatgaagagagaactctcatgaat
gattttacagggaggatcaaacgcgatgagtggaagcctcctaaaggagaactaagaacg
gtgactatcgcactggatacagcacaatatcatatggatgtttctgatatggcagaaaag
ggtattgaagatgtgtatggcactttcaacatcttgatgaggcggaaaccaaaagagaac
aatttcaaagcaattttggaatccataagggatctaatgaatgaatcatgtattgttcct
gattggttgcacgacatatttttgggttatggaaatccttcagcagcgaaatggactaat
atgccagacctcctggaagttgtagattttaaagacaccttccttgatgctgttcacgtc
aaagatagctttccgaactatcaggtttgctttacaaattcagatggtagtatgagcatg
caaccttgtccacccttccgtattaagtttccaaaaaattttaatggcaatctcaattct
ctttctggcaacgagattgctaaagtatcttcaacggattctgctgcttcggcagacgct
gattctgataaagagaagcttctagttgagacttatattcctcctgatccaggtccatat
ccccaagatcaaccgaagcagaattttgtacggtttactcccacacagattgaggccatc
atatcaggaattcagcctggattaagtatggtggttggtccacctggtacgggaaagacg
gatacagctgtgcaagtcttgaatgtgctttatcataattgcccttctcagagaacattg
ataattacccactcaaatcaggctttgaatgatctttttgaaaagataatggagagggat
gtacctgctcgatatctacttcgacttggtcaaggtgagcaagaattggcaactgatctt
gacttcagtcgccaaggccgtgtgaatgcaatgctagttcggcgattagaactgcttagt
gaagtggagcgccttgcaagatctctacagctgcctgaggatgtggcatatacatgtgaa
actgctggatacttctggttgcttcatgtgtactctcgctgggaactatttttagctgct
tgtgttgagaatcaagacaagccgtcatttgttcaggaccgatttccttttaaggagttc
ttcaacgattctcctaggccaattttcacgggtcagtcctatgaaaaagacatgcatgca
gctaaaggttgcttccggcacctgcaaactatgtttcaagagctcgaagaatgtagagca
tttgagttgctcaagtcaacagttgatagatctaactacctgatgaccaagcaggcgaaa
atagtggcaatgacttgcacccatgcggctcttaaaagaaaagattttctgcacctggga
tttaaatacgataacttagtgatggaagaaagtgctcaaatcttggagattgaaactttt
atcccaatgttgctccaaaggcaggaagatggctatgccaggcttaaacgttgcatattg
ataggtgaccatcaccaactgcctcctgttgtgaaaaatatggctttccagaagtacagc
catatggatcagagcctattcacaagatttgtgcggcttggaattccatatattgagctc
aatgcacagggcagagctaggccaagtttagcaagactttacaattggagatataaagat
cttggtgatcttcagtttgtgagagagaacactatcttccatagagcaaatgctggattc
tgttatgactatcagttggtagacgttcctgattaccgtgggaggggcgagactgctcca
tcaccttggttctatcaaaatgaaggagaggctgaatatattgtaagcgtgtatatgtac
atgcgattacttgggtatccagccaacaaaatatccatattgactacatacaatggtcag
aaacttttaattcgtgatgttatcaacagaagatgtgtcccattagacttcattggacca
cctcacaaggtaaccaccgtcgacaaatttcaaggacagcaaaatgattttatcttgtta
tctcttgttcgtactcgctttgtgggccatcttcgtgatgtgagaagattggttgtcgca
atgtcacgcgctcgattggggctttatgttttctgccgacgtttgctgtttgaacaatgt
tatgaattgcagcctacatttcagcttcttcttcagaggcctgatcttcttgcattgaac
ctaagcgaggtcggtgcattcactgatcgtcatgttgaagaaacaggtccagcccagctt
gttggtggaatcgaagagatggccaacattgtaaattacaagatacatcatgtctatcag
gaacgattgatgagtcaccagttaaatcaatttcctgccaaccccccagagcaagacttt
gtggatattaatgcgcaagaagaaaatggcctactggattcagaagtttctatgcggtca
atggatatagatattcatggtttggcaaatggggctgagaaggatattctacctgatggc
aactcaaatgatgtatcaagtccagaaacgtatgcgaaacaggatgggaataagcaaata
cagaacgatttaaatatagaagctgatgtggatatgcaagaaaatgatataaatggagga
gcacttgaaagcaatcttggtgagaacatgatggataagtag
DBGET
integrated database retrieval system
