KEGG   Primulina tabacum: 142531342
Entry
142531342         CDS       T11246                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
ptab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142531342
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    142531342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142531342
   04131 Membrane trafficking [BR:ptab04131]
    142531342
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142531342
Membrane trafficking [BR:ptab04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    142531342
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    142531342
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    142531342
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 ANAPC4_WD40 WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR19_1st EIF3I Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 142531342
NCBI-ProteinID: XP_075493556
LinkDB
Position
17:complement(28180433..28182508)
AA seq 301 aa
MPATKIETGHNDVVHDVSVDYYGKRVATASSDTTVKINGVSNNSASQHLATLSGHRGPVW
QVSWAHPKFGSILASCSYDGKVIVWKEGNQNEWSQFHVFEHKSSVNSIEWAPHELGLCLA
CGSSDGNISVYTAQSDGGWETTKIDQAHPVGVTSVSWAPSMAPGALVVSGMLDPVQKLAS
GGCDNTVKVWRLYNGNWKMDCFPALQKHSDWVRDVAWAPNLGLPKSTIASASQDGTVVIW
TVAKEGDQWQGKILKDFKMPVWRVSWSLTGNLLAVAAGDNSITLWNEAVAGEWQEVTTVD
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgcaacaaagatagaaactggccacaatgatgtcgttcacgatgtctcggtggat
tactatgggaaacgtgtggcaacagcatcatctgataccactgtaaaaataaacggtgtt
agcaataattcggcatctcagcatctcgctactttgagtgggcatcgaggccctgtctgg
caggtttcttgggcacaccccaagtttggttcaattcttgcttcttgttcttatgatgga
aaagttattgtctggaaggaaggtaatcagaatgagtggtcacagttccatgtcttcgag
cacaaatcatcagtcaattctatcgagtgggctcctcacgagcttggactttgcttggca
tgtggttcttctgatggtaacatctcagtatacacagctcaatcagatggtggctgggaa
accacaaaaatagaccaagcacaccccgttggggtgacatctgtttcttgggccccttca
atggctcctggcgcattagttgtatcggggatgctggatcctgttcagaagctggcttcc
ggtggttgcgacaacaccgtgaaggtctggaggttgtacaacggaaactggaaaatggac
tgtttcccagctcttcaaaagcactcggattgggtgagagacgttgcttgggcaccaaac
ttagggcttccaaagtccacgattgcgagtgcctctcaggatggtacagttgttatatgg
actgtagcgaaggaaggcgatcaatggcagggtaaaattttgaaggatttcaagatgcct
gtttggagagtgtcctggtccctgaccggaaacttgttggctgtggcagctggggacaac
agcatcacactgtggaatgaagctgttgctggggagtggcaagaggtcaccacagttgat
cgttag

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