Primulina tabacum: 142531730
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Entry
142531730 CDS
T11246
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142531730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142531730
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
142531730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
142531730
NCBI-ProteinID:
XP_075494068
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All DBs
Position
17:10196710..10200309
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AA seq
200 aa
AA seq
DB search
MVTSHVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPSLQPDWQIGECVAVWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIHP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaacatctcatgtggtgaatacatatcctctgtcgagctacactttcggcactaaa
gagccgaaaatggagaaagatacttcagtcgctgatcgtcttgctcgtatgaaagtcaat
tacatgaaagaaggcatgaggactagcgtcgaggggattttgatggtacaagaacataat
catccccatatccttcttctgcaaattggaaatactttctgcaagctgccaggtggcaga
ttgaaaccaggagagaacgagattgaaggattgaaaaggaaactctcgagcaaacttgca
gctaattcaccttctttacagcctgattggcagattggtgagtgcgtagcagtctggtgg
agaccaaatttcgaaaccattatgtacccttattgccccccacacataacaaagcctaag
gagtgcaagaagcttttccttgttcacttgtctgaacgagagtattttgctgtccctaag
aacttgaaacttcttgctgttccactgtttgagctatatgacaatgttcagagatatgga
cctgttatatctaccatcccacagcagctatccagattccagttcaacatgatccatccg
tag
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