KEGG   Primulina tabacum: 142532143
Entry
142532143         CDS       T11246                                 
Name
(RefSeq) protein SEH1-like isoform X1
  KO
K14299  nucleoporin SEH1
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142532143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142532143
   04131 Membrane trafficking [BR:ptab04131]
    142532143
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142532143
Membrane trafficking [BR:ptab04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    142532143
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st ANAPC4_WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR19_1st WD40_Prp19 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 142532143
NCBI-ProteinID: XP_075494511
LinkDB
Position
18:complement(28412667..28417555)
AA seq 326 aa
MDKHILTLDKGTSCTAWNHCGLRLAAGLNDGTLSIYDSADAASSVFNCTSRVKVQEGSIL
KVVWVPPEFGDAIACIGACGTLSLWEEVAEDTEGNQWKLRKSFERNTSQVLDAQFGGCHT
SLKLVAAFADGQVKIYELLDMLDLEKWQLQAEFQNVVDVVSKFGNASCLSASISWNPLKS
EVQQAVFVLGFSSNMPSLNSPKVWEYDQDHQRWLPVAELSMPEDKSDEEVYAVAWAPNIG
RPYELIAVATQKGIGLWHIGLNPDADGRLSVNQVSMLHGHDGQVWQMEWDMSGMTLATTG
TDGVVRLWQANLNGVWHEQAVLAPAS
NT seq 981 nt   +upstreamnt  +downstreamnt
atggataaacacattttgacgctcgacaaggggacgtcatgcactgcgtggaaccactgt
ggcctgagattggctgctggtttgaatgatggtacattgtccatttatgattcagctgat
gcagcgtcttccgttttcaattgcacctccagagttaaggttcaagaaggcagcatcttg
aaagtggtctgggttccaccagaatttggagatgcaattgcatgcattggtgcctgtgga
actttgtctttgtgggaggaagttgccgaagatactgaaggcaatcagtggaagctgcgt
aaatcctttgaaagaaacacgagccaagttctagatgctcaattcggtggttgtcataca
agtttgaaattggttgctgcatttgcagatggtcaagtaaaaatctatgagctactcgat
atgcttgatttggagaagtggcaacttcaggccgaatttcaaaacgtagttgatgtggtg
tccaagtttggtaatgcttcatgcctgtctgcttccatctcttggaatccactaaaaagt
gaagtccagcaggcagtctttgttttgggctttagctctaatatgccatcgttaaactcc
cctaaggtctgggagtatgatcaggatcatcaaagatggcttccagttgcagaactttcc
atgccagaggacaagagtgatgaggaggtctatgcagttgcttgggcacctaacataggc
aggccttatgaactgattgctgtggcaactcaaaagggaatcggactctggcacatagga
ttaaaccctgatgctgatgggaggctttcggtgaatcaagtttcaatgctccatggccat
gatggtcaggtatggcagatggaatgggacatgagcggaatgacactggctactactgga
actgatggtgtagtcagattgtggcaggcaaatttgaatggagtttggcacgagcaagcc
gttttggcacctgcaagttaa

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