Primulina tabacum: 142532166
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Entry
142532166 CDS
T11246
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptab03016
]
142532166
Transfer RNA biogenesis [BR:
ptab03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
142532166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
ANAPC4_WD40
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
142532166
NCBI-ProteinID:
XP_075494545
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Position
18:complement(29814543..29821239)
Genome browser
AA seq
1320 aa
AA seq
DB search
MNNLKISWEVAARLQLQSESVEEFLRLSAIDVERDLLFFASSSNFIYTMQNLSSQTEGAW
SKTSSPASAQLIDLEAGDYITCLEYVMEKEALLLGTSYGLLLLFNVYDNATEIVGRVEGG
VRCISLSPDGDLFGMVTGFQQILVMNLDWDLLYEMALDDLSEDIDVHELASSAEVLFDNP
ISWRGDGKFFAALSKAHDSFPSNKKLKIWERDSGALHAVSEPRPFMGSALDWIQSGGKIA
AVYDRIEEKKCPSIVFFERNGLERSSFSINEGIEATIDILRFNCNSDLLAAIVRNETYDT
LKIWVFSNNHWYLKQEIRYSRNDKVNFMWDPIKPLRLICWTLSGQIISYKFVWVTAVRDN
STAFVIDGSKILVTPLALSLIPPPMYCFSLEFPSAIRDMTYCSKVSQNRLVASLSDGGLS
IVELPLLEQWDELEGNHFKVEASYFGTEFGSLLHLSLLDSHVLLGVSYFRFGDSDGTKRT
PFDKDGSLGYYLMEIEISCSEDQIPSSVTSSGWQCEISSQIYLEGVVICIAPVPSHRSLA
FVQFDGGKLSEYIPKAGTNRGASLRKCDNKNFLFSCPQMDIAQVGDFTPDKLLLLGLDDN
GSLHTEGRILCKNCRSFSFYSNSGDSTMTHLVIATKQDLLFIVDFGDIVRGELEQKYENF
MPIVKSRKSETESIYINIWERGAQVVGVLHGDESAIILQTPRGNLECVYPRKLVLASIVN
SLDKGHFRDALHMVRRHRIDFNIIVDRCGWQTFVQSAADFVRQVRNLSYITEFVCGLKNI
NIMETLYKNHLSAHHIKDECKDVKVSNDDNIVNSVLMAIHKALEEHIEDSPSREICILTT
LAKNDPPALEQALERVKFIREMELSGTDDSKRTSYPSSEEALKHLLWLSDSEAVFEAALG
LYDLNLAAIVALNSQKDPKEFLPLLEELENMPMLLMKYKIDLKLRRYESALRHIFSAGDP
YYKDFTDLMVNVPELYPLGLQLIDQPHKKRQILEAWGDHLFSSKCFEDAATIYLCSFHLE
KALKAYRACGNWRGVLTVAGLIKLGKDELLHLARELCEELQALGKLGDAAKIVLDYCGDI
NNGISLLVQAREWEEALRIAFLHQRGDLVSVVKSSSLECSSLLIGEYNEGMEKTGKYLTR
YLAVRQRRLLFAATIQSDERSVGYLDDETGSQASTTFSELSAYTTGTKKGSAASTSLSTS
ARGRGRQRNRGKIRAGSPSEEMALVEHLKGMSLTEGAKCELKSLLTCLVMLGEEETARKL
QRSAEKFQVAQIAAVKLTEDAMPSDKVDEHVFLLERYIQNVRKEPLHNSEAFSWMSKVLP
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagatttcttgggaggtggctgcgaggttgcagttacagtctgaaagt
gtggaggagttcctccggttgtcggccattgacgtggagcgcgatctcctcttcttcgct
tcatcctccaatttcatttacacaatgcagaatctttcatctcaaactgaaggagcttgg
agtaagacctcatcacctgcttctgctcagctcattgatctagaagcaggagattacatt
acttgtttagaatacgtcatggaaaaggaagccttgctcttgggaacttcttatggtctt
ctattactctttaatgtgtatgataatgcaacagagattgttggacgagtcgaaggtggt
gtcaggtgcatctcactaagtccagatggtgatttgttcggtatggtcactggttttcag
cagattctagtaatgaatcttgattgggatctgttgtatgagatggcactagatgatttg
tcagaagatattgacgtacatgaattagcatcttctgccgaagttttgttcgacaatccc
atttcatggaggggcgatggcaagttttttgcagctctaagcaaggcgcatgactcattt
ccctcaaataaaaagcttaaaatttgggaacgtgactcaggggcgctccatgctgtctca
gaaccaaggcctttcatgggatcagcattggactggattcaaagtggaggaaaaattgct
gctgtctatgatcgaattgaagaaaagaaatgcccatctatagtcttttttgagagaaat
ggtttagagagaagctcattcagtatcaacgagggaattgaggctactatagacattctg
aggttcaactgtaactctgatcttcttgctgctattgttagaaatgaaacatacgatacc
ctcaagatttgggtttttagtaataatcactggtacttaaagcaggagattagatattca
aggaatgataaagtgaacttcatgtgggatccgataaaacctcttcggttgatttgttgg
actcttagtggccaaattataagctataagtttgtttgggtcacggctgtaagggataat
tcaacagcatttgtcattgatggctcaaagatactagtaaccccattagcgttgtccctg
attccacctcctatgtattgttttagcttagagtttcctagcgctattcgtgatatgact
tactgctccaaagtttcacaaaatcgtctggttgcatctctgtcagatggaggtttaagt
attgtggagcttcctctgcttgaacaatgggatgagctggaagggaaccattttaaagtc
gaggcttcatattttggtacagaatttggatctttgctacatctgtctttgttggattca
cacgtgcttcttggtgtttcctattttcgttttggtgatagtgatggcactaagagaacc
ccgtttgataaggatggcagtctaggttattacctgatggaaattgagatcagttgctct
gaagatcaaattcctagttcagtgacatcctcaggttggcaatgtgaaatttcgagtcag
atttatcttgaaggggtggttatttgtatagctcctgtgccatctcatagatctttggca
tttgttcagtttgatggtggaaaattatctgagtacatcccaaaggctggaacaaataga
ggagccagtcttcgtaaatgtgacaataagaatttcttgttttcctgccctcagatggat
attgctcaagttggagattttacaccagataaattgttactccttgggcttgatgacaat
ggcagcttgcatactgagggaaggatattatgtaagaactgcagaagcttttcattttac
tcgaattctggcgattcaacaatgactcatttggtgattgcaacgaaacaggatttacta
tttattgttgactttggtgatatcgtgcgtggggaattggaacagaagtatgagaatttc
atgcctattgtgaagagtagaaagtctgaaactgaaagcatttatataaatatatgggag
agaggggcccaggttgtaggtgtcctccatggagatgagtctgctatcatactacagaca
cctcgaggaaatcttgaatgtgtgtatcccagaaaattggtccttgcttcaattgtaaat
tctttggacaaaggtcatttcagagatgccttgcacatggtaagacgacataggatagat
tttaatatcattgttgaccgttgtggttggcaaacctttgttcagtcagctgcagatttt
gtcagacaggtgaggaatttgagctacataacagagtttgtttgtggcttgaaaaatata
aatatcatggagacactgtacaaaaatcacttgtccgcgcatcacataaaggatgagtgc
aaagacgtaaaggtttcaaatgatgataatatagtaaactctgtcctgatggccatccac
aaggcgcttgaggagcacatcgaggatagtccttcacgagagatttgcattctgaccact
ttagctaaaaatgaccccccagctctggaacaggctttggaaagagtaaagtttatccga
gaaatggagctctcgggaactgatgattcaaagagaacgtcttacccttcgtccgaggaa
gctctgaagcatctgttatggttgtctgattcagaggcggtttttgaagctgctttgggg
ctttatgatttaaatcttgccgctattgttgcgttaaattcacaaaaggatcctaaagaa
tttctgccactacttgaagaattggaaaacatgccaatgcttttgatgaagtataaaata
gaccttaaactgagaagatatgaaagtgctctcaggcacattttttctgcgggagaccct
tactataaagattttacagacctgatggtgaacgttcctgaactatatcctctgggtctt
cagttgattgatcagccgcataaaaaacggcaaattcttgaagcatggggagatcatctt
ttttcttcaaaatgctttgaggatgctgctaccatctatttatgtagcttccatctagaa
aaagctctaaaggcttatcgtgcttgtggcaattggaggggggttctgacagtagctggc
ctcattaaacttgggaaggatgagcttttgcatctggcgcgtgaactctgcgaggagctt
caggcacttggtaaattaggtgatgctgctaaaatagtattagattattgtggtgatata
aacaatggtatcagcttattggtccaagcaagagaatgggaagaggctttgagaattgct
tttctgcaccaaagaggcgatctggtttcagtagtgaaaagttcttctctggagtgttct
agcttgcttattggagaatacaatgaagggatggaaaaaactggcaagtacttgacccgc
tacttggctgttcgtcaaagaagattgttatttgctgcaacaatccaatctgacgagcga
tctgtgggctatcttgatgatgaaacaggttcacaagctagcactactttcagtgagttg
agtgcatataccacagggaccaaaaagggttcagctgcatcgacttccctgagcacgtct
gctaggggcagagggcgtcagcgaaatagaggaaaaataagagctgggagcccgagtgag
gagatggctctagtagagcatttgaagggcatgtctctaaccgaaggagcaaaatgtgag
cttaaatctctactgacttgtcttgtgatgcttggtgaagaagaaactgctcggaaatta
cagcgtagtgctgaaaagttccaggtcgctcaaatcgcagcggtaaagttaactgaggat
gcgatgcccagtgataaggttgatgaacatgtgttcttgttggaacgttacattcagaat
gtgcgcaaggaaccactgcataattcagaggccttctcttggatgtcgaaagtattgcct
tga
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