Primulina tabacum: 142532611
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Entry
142532611 CDS
T11246
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142532611
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142532611
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GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_shadow
Chromo_2
Chromo
Motif
Other DBs
NCBI-GeneID:
142532611
NCBI-ProteinID:
XP_075495043
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Position
18:complement(1743417..1748083)
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AA seq
595 aa
AA seq
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MGVKNLWDILESCKKTLPLHHLQNKRVCVDLSCWMVQLQSVNRSHCATKEKVYLRGLFHR
LRALIALNCSLIFVTDGAIPAVKLSTYRRRLNNAENEAIVDAANHCKVSSIKRNMGSEFS
RMIKEAEVLALALGIPCLNGLEEAEAQCALLNSESLCDGCFTTDSDAFLFGARTVYRDIC
LGEGGYVVCYEMDDIERFLGFGRNSLISLAVLLGSDYTQGVRGFGPESACQFVKSIGDST
VLRRLALEGLSIVKKQKSSKRKEQTLTSKHEEHFAILKTNFVGNGCNLPIDNQFLKVIDA
YLKPKCHSAESVAVHRALSVYTFGRSQLHQICAQFFDWPPEKTDEYILPKIAERDLRRFS
NLCSTSSQLGVYLPIDEMPVKCPVSSIVKKRISRGRDYFEVTWEDMHGLKASVVPADLVE
SACPEKILEFHERKAQEKKPKHKSRPKKVGKTVLKEIDDKLRELLLDSDRDTNNTDIIGG
LVPEEISTSTHVDMLDPRACHGSKLKVNSRGGEGGKNGVSSSSDCYATGLSFPETEIIDL
MSPSPSVRARGISECQDVKCIDVELSESDNDVSPEHARRARELRLFIARIGDRNS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaatctctgggacatattggaatcttgcaagaaaacccttcctcttcac
catctccagaacaagagggtatgcgtggatttgtcttgttggatggttcaacttcaaagt
gtgaatagatctcactgtgcgacgaaagagaaggtttatttgaggggtttgttccaccgc
ctaagagctctcattgccttgaattgtagtcttatctttgttacagatggagcaattcct
gctgtcaaattatctacatacaggcgccgcttaaataatgcagagaacgaagccattgta
gatgctgcaaatcattgtaaagtatcgtctattaaaagaaacatgggatctgagttttca
cggatgataaaggaagccgaagttctagctttggcgcttggtattccatgcctgaatgga
cttgaggaggctgaagctcaatgtgcattgctaaactcagaatcgttatgcgatggatgt
ttcacgacagattctgatgcatttttgtttggggcgagaacggtctacagagatatttgt
cttggtgaaggtggttatgttgtttgctatgaaatggatgatattgagagattcctcgga
tttggaaggaattccttgatttctctagctgttcttcttggcagtgattatacacaagga
gttcgtggttttggaccggagtcagcttgtcagtttgtcaaatctatcggtgactccact
gttcttcgacgtcttgcattagagggattgtcaattgtaaagaaacaaaagagctccaaa
agaaaagaacaaactttaacaagcaaacatgaagagcactttgccattctcaagactaat
tttgttgggaatgggtgtaatttgcctatcgacaatcagtttttgaaagtgattgatgca
tacttgaagccaaaatgccattctgcagaatcagttgccgtgcacagggctctttctgtg
tatacctttggtcgtagccagttgcatcagatatgtgctcagttttttgactggcctcca
gagaaaacagatgaatacattcttccgaagatcgctgaaagagacttgaggcgattctct
aacctttgctccacctcatcacaacttggagtctatctgcctatagacgagatgccagtc
aagtgtcctgtatctagcattgttaagaagagaatatctcgaggaagagactactttgag
gttacttgggaagacatgcatgggctcaaagcatctgtggtacctgccgatcttgtggag
agtgcttgtcccgaaaagattctggaatttcatgaaaggaaagctcaagaaaagaaaccg
aagcataagtcgaggccaaagaaagtagggaagacagttctgaaggaaattgatgataaa
ctacgggaacttctgcttgatagtgaccgagacacgaacaatactgatattataggagga
ttggtaccagaggagatcagtacctccacccatgttgatatgctcgacccaagggcatgc
catggttccaagttgaaggttaacagtcgaggaggcgaaggagggaagaatggggttagc
tccagttcagattgctatgccactggtttgagtttccctgaaacagaaataattgatttg
atgagcccttcaccctcagtacgtgctcgtggcatttctgaatgccaagatgtgaagtgc
attgatgttgagttgagtgagtcggataatgatgtttcacctgaacacgcaagaagagcc
agggagctcagattgttcatagccagaataggagatcgaaactcttga
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