Primulina tabacum: 142532620
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Entry
142532620 CDS
T11246
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142532620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142532620
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
SR proteins
142532620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Transformer
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142532620
NCBI-ProteinID:
XP_075495053
LinkDB
All DBs
Position
18:complement(29087076..29091888)
Genome browser
AA seq
251 aa
AA seq
DB search
MSGRFSRLVYVGNLPADIRESEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENAPDAED
SIRGRDGYNFDGCRLRVELAHGGRGPSSSNERRTGHGRVADGGRHGISRHSEYRVVVRGL
PSSASWQDLKDHMRKAGDVCFAEVYRDSEGAYGLVDYTNYEDMKYAIRKLDDTEFKNPWT
RTYIRVKEHKGSPLRSRSRSRSRGRSPRRKRSKSSDRPASRSLSASPAKPSRSRSRSRSK
SASPKQDGIDS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttctctcgcttagtttatgttgggaatcttccggctgatataagagag
tctgaagttgaagacctgttttacaagtatggtcgcatattggatattgaactgaagatt
cctccacgtcctccatgttattgctttgtggagtttgagaatgccccggatgctgaagat
tctattaggggtagagatggctataactttgatggttgtcgactgagggttgagcttgca
catggtggtagaggaccctcatcatctaatgagcgacgtactggtcatggccgggttgcg
gatggtgggcgccatggcatttctcgccattctgaatatcgtgttgttgttcgtgggctt
ccttcttctgcttcttggcaagatttgaaggatcatatgcggaaagctggggatgtttgt
tttgcagaagtttatcgtgacagtgaaggagcctatggtcttgttgattataccaattat
gaggacatgaaatatgctataaggaaacttgatgatacggagttcaaaaatccttggacc
agaacttatatccgggttaaggaacacaagggcagtccattaagaagccgaagtagaagt
cgcagcagaggccgaagtccgaggaggaaaagaagcaaatcgtcggaccgacctgcttcc
agatcactatctgcatctcctgctaaaccttctaggtccaggtccagatcaaggtcaaag
tctgcttccccaaaacaggatggtatagattcctag
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integrated database retrieval system
