Primulina tabacum: 142532814
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Entry
142532814 CDS
T11246
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ptab Primulina tabacum
Pathway
ptab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142532814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142532814
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
142532814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
Utp13
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_Nup120_160
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_DCAF12
WD_LRWD1
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_ACSF4
WD40_like
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR75_2nd
eIF2A
Cytochrom_D1
PROPPIN
Ge1_WD40
Beta-prop_RIG_1st
Nbas_N
UTP15_C
Motif
Other DBs
NCBI-GeneID:
142532814
NCBI-ProteinID:
XP_075495418
LinkDB
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Position
18:21319598..21325943
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AA seq
868 aa
AA seq
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MASAVTLKKNYRCVNSLQQFYTGGPYVVSSDGSFFVCACDDALKIIDSSNASIKSTIDGD
SEPVTALVLSPNDNFLFSTSHSRQIRVWDLVSLKCIRSWKGHEGPVMGMACHASGGLLAT
AGADKKVQVWDVDGGFCTHYFKGHKGVVTSIKFHPDPSRLLLFSGGDDATVRVWDLTSKK
CIATLEKHQSVVTSIAISEDGWALLTAGRDKVVNVWNLHNYTCATTVPTYEAIEAVCAID
SASPFASCLSSSIKKHGQKKIGLSPIPFITVGERGIVKIWNSDGAVLLFEQKSSDVTIIM
DKEDVKRGFTSALMLPLGQGLLCVTADQQFLIYVLEVHSEVGLNLTLSKRFIGYNEEISD
MKFLGEEEQFLAVATSVEQVRVYDLASMSCSYVLSGHTDVVLCLDTCVQSPGRTLIVTGS
KDNNVRLWDSQSRCCIGVGMGHMGAVGAVAFSKKNRNFFVSGSSDRTLKVWSLDGVSDDV
KDVSNLKVKAVVAAHDKDINSLAVAPNDSLICSGSQDRTACVWRLPELVSVVVLKGHKRG
IWSVEFSPVDQCVITASGDKTIRIWSISDGSCLKTFEGHTSSVIRASFVTCGTQFVSCGA
DGLVKLWTVKTNECVATYDQHEDKIWALAVGKKTEMIATGGGDAVINLWHDSTAADKEEA
FRKEEEGVLRGQELENAVFDADYIKAIQLAFELRRPHKLFELFSELCRKADGKSQIEKAL
GPLTKEELHKLLEYIRDWNTKPKLCHIAHSVLSRLFSAIPPTEIIEIKGIGELLEGLIPY
SQRHFSRVDKLESNTFLFDYTLADMSVLEPEGMDTGSRDEDMNHSDITEEEPIPAAVSSR
KKRKSQKSQDEQQKKSKVAYKSVAATAI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggtgactctgaagaagaactaccgttgcgttaactcgcttcagcaattc
tataccggaggaccttacgttgtatcatccgacggctcgttcttcgtctgcgcctgtgac
gatgctttgaagattattgattcttccaatgcttccatcaaatcaaccattgatggtgat
tcagagcctgttacggctctcgtactgagccctaatgataattttcttttctccaccagc
cacagccgtcaaattcgagtctgggaccttgtttctctcaaatgcatccgctcctggaag
gggcacgaagggcctgtgatgggaatggcttgccatgcctctgggggattgctggctaca
gcaggggctgataagaaagtgcaggtgtgggacgtggatggaggcttctgcacccattat
ttcaaggggcataaaggcgtggtaaccagtattaagttccaccctgacccgagccgctta
cttcttttctcaggtggtgatgatgctactgtaagagtgtgggatcttactagcaaaaag
tgcatagcaactctagaaaaacatcagtcagtggttacttcgattgcaatatctgaagat
ggatgggccttgcttactgctggaagagacaaggttgtgaacgtgtggaacctacacaat
tatacctgtgcaactactgtaccgacatatgaggcgatagaagcagtgtgcgcaatagat
tctgcatccccttttgcctcatgtttgtcgtcatcaataaagaaacatgggcagaagaag
ataggtttatcacctattccatttataactgttggcgagcgtgggattgtgaagatatgg
aattcagatggggcagtactccttttcgagcagaaatcttctgacgttactattattatg
gacaaagaggatgttaagaggggttttacatcagctttgatgctaccattaggtcaggga
ttgctctgtgttacagctgaccagcagtttctcatctatgttttggaagtacattctgaa
gttggtctgaatttaaccctgagcaaaaggtttattggatataatgaagagatttctgat
atgaagtttttgggtgaagaagaacaattccttgcagttgctaccagtgtagagcaggta
cgagtatatgatctggcatcgatgtcatgttcctatgtattgtctggccatactgatgta
gttctatgccttgatacctgtgtccaaagtcctggaagaacacttatagttactggaagc
aaggataacaatgttaggctgtgggattcccaaagcagatgctgcattggagttggcatg
ggtcatatgggagctgttggtgctgttgctttttcaaagaaaaacaggaacttttttgtt
agcggcagtagtgatcgtacacttaaagtgtggagcttagatggagtttctgatgatgtg
aaagatgtttccaatttgaaagtgaaagcagttgtagcggcccatgacaaagatataaac
tcgttagcagttgcacccaatgacagtctcatttgtagtggctcccaggaccgtacagct
tgtgtatggaggctcccagaactggtttctgtggttgtacttaaaggacataaaagggga
atttggtctgtggagttttctccagttgaccaatgtgtcataacagcttctggtgataag
acgataagaatatggtcaatctctgatggttcatgtttaaaaacatttgaaggacacaca
tcaagtgtgattagggcatcatttgtcacatgtggaacccaatttgtttcttgcggtgcg
gacggcttggtgaagctatggactgttaaaacaaacgaatgtgtggctacttatgatcaa
catgaggacaagatttgggcattggctgtaggtaagaagacagaaatgattgcaacaggt
ggtggtgacgcagttattaatttgtggcatgactctacggctgcagataaagaggaagcc
tttcgcaaagaagaggaaggtgttttgagggggcaagaactagaaaatgctgtttttgat
gccgactacatcaaagccatccagcttgcatttgaacttcggagacctcacaaactcttc
gagttatttagtgagctctgcaggaaggcggatggcaaatctcagattgaaaaagctctg
ggtcctcttaccaaggaagagttgcacaaacttctggagtatataagagattggaatacg
aagccaaaactatgtcacatagcgcactctgtgttgtctcgtttatttagcgccatcccg
cctacagaaattattgagataaagggcatcggggaactgcttgaaggtcttattccttat
tctcagaggcattttagtagagtagacaagttggaaagcaacactttcctctttgactat
acactagctgatatgtcagttctcgaacctgaaggaatggatacagggtcaagagatgaa
gatatgaatcactctgacattacggaagaagagcctataccagctgcagtttcatcaaga
aagaagcggaaatcgcagaaatctcaagacgagcaacagaaaaaatcgaaggtggcttac
aaaagcgttgctgccactgccatatag
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