KEGG   Primulina tabacum: 142532814
Entry
142532814         CDS       T11246                                 
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ptab  Primulina tabacum
Pathway
ptab03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    142532814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptab03009]
    142532814
Ribosome biogenesis [BR:ptab03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    142532814
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta EIF3I Utp13 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_Nup120_160 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_DCAF12 WD_LRWD1 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_ACSF4 WD40_like Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR75_2nd eIF2A Cytochrom_D1 PROPPIN Ge1_WD40 Beta-prop_RIG_1st Nbas_N UTP15_C
Other DBs
NCBI-GeneID: 142532814
NCBI-ProteinID: XP_075495418
LinkDB
Position
18:21319598..21325943
AA seq 868 aa
MASAVTLKKNYRCVNSLQQFYTGGPYVVSSDGSFFVCACDDALKIIDSSNASIKSTIDGD
SEPVTALVLSPNDNFLFSTSHSRQIRVWDLVSLKCIRSWKGHEGPVMGMACHASGGLLAT
AGADKKVQVWDVDGGFCTHYFKGHKGVVTSIKFHPDPSRLLLFSGGDDATVRVWDLTSKK
CIATLEKHQSVVTSIAISEDGWALLTAGRDKVVNVWNLHNYTCATTVPTYEAIEAVCAID
SASPFASCLSSSIKKHGQKKIGLSPIPFITVGERGIVKIWNSDGAVLLFEQKSSDVTIIM
DKEDVKRGFTSALMLPLGQGLLCVTADQQFLIYVLEVHSEVGLNLTLSKRFIGYNEEISD
MKFLGEEEQFLAVATSVEQVRVYDLASMSCSYVLSGHTDVVLCLDTCVQSPGRTLIVTGS
KDNNVRLWDSQSRCCIGVGMGHMGAVGAVAFSKKNRNFFVSGSSDRTLKVWSLDGVSDDV
KDVSNLKVKAVVAAHDKDINSLAVAPNDSLICSGSQDRTACVWRLPELVSVVVLKGHKRG
IWSVEFSPVDQCVITASGDKTIRIWSISDGSCLKTFEGHTSSVIRASFVTCGTQFVSCGA
DGLVKLWTVKTNECVATYDQHEDKIWALAVGKKTEMIATGGGDAVINLWHDSTAADKEEA
FRKEEEGVLRGQELENAVFDADYIKAIQLAFELRRPHKLFELFSELCRKADGKSQIEKAL
GPLTKEELHKLLEYIRDWNTKPKLCHIAHSVLSRLFSAIPPTEIIEIKGIGELLEGLIPY
SQRHFSRVDKLESNTFLFDYTLADMSVLEPEGMDTGSRDEDMNHSDITEEEPIPAAVSSR
KKRKSQKSQDEQQKKSKVAYKSVAATAI
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggcgtcggcggtgactctgaagaagaactaccgttgcgttaactcgcttcagcaattc
tataccggaggaccttacgttgtatcatccgacggctcgttcttcgtctgcgcctgtgac
gatgctttgaagattattgattcttccaatgcttccatcaaatcaaccattgatggtgat
tcagagcctgttacggctctcgtactgagccctaatgataattttcttttctccaccagc
cacagccgtcaaattcgagtctgggaccttgtttctctcaaatgcatccgctcctggaag
gggcacgaagggcctgtgatgggaatggcttgccatgcctctgggggattgctggctaca
gcaggggctgataagaaagtgcaggtgtgggacgtggatggaggcttctgcacccattat
ttcaaggggcataaaggcgtggtaaccagtattaagttccaccctgacccgagccgctta
cttcttttctcaggtggtgatgatgctactgtaagagtgtgggatcttactagcaaaaag
tgcatagcaactctagaaaaacatcagtcagtggttacttcgattgcaatatctgaagat
ggatgggccttgcttactgctggaagagacaaggttgtgaacgtgtggaacctacacaat
tatacctgtgcaactactgtaccgacatatgaggcgatagaagcagtgtgcgcaatagat
tctgcatccccttttgcctcatgtttgtcgtcatcaataaagaaacatgggcagaagaag
ataggtttatcacctattccatttataactgttggcgagcgtgggattgtgaagatatgg
aattcagatggggcagtactccttttcgagcagaaatcttctgacgttactattattatg
gacaaagaggatgttaagaggggttttacatcagctttgatgctaccattaggtcaggga
ttgctctgtgttacagctgaccagcagtttctcatctatgttttggaagtacattctgaa
gttggtctgaatttaaccctgagcaaaaggtttattggatataatgaagagatttctgat
atgaagtttttgggtgaagaagaacaattccttgcagttgctaccagtgtagagcaggta
cgagtatatgatctggcatcgatgtcatgttcctatgtattgtctggccatactgatgta
gttctatgccttgatacctgtgtccaaagtcctggaagaacacttatagttactggaagc
aaggataacaatgttaggctgtgggattcccaaagcagatgctgcattggagttggcatg
ggtcatatgggagctgttggtgctgttgctttttcaaagaaaaacaggaacttttttgtt
agcggcagtagtgatcgtacacttaaagtgtggagcttagatggagtttctgatgatgtg
aaagatgtttccaatttgaaagtgaaagcagttgtagcggcccatgacaaagatataaac
tcgttagcagttgcacccaatgacagtctcatttgtagtggctcccaggaccgtacagct
tgtgtatggaggctcccagaactggtttctgtggttgtacttaaaggacataaaagggga
atttggtctgtggagttttctccagttgaccaatgtgtcataacagcttctggtgataag
acgataagaatatggtcaatctctgatggttcatgtttaaaaacatttgaaggacacaca
tcaagtgtgattagggcatcatttgtcacatgtggaacccaatttgtttcttgcggtgcg
gacggcttggtgaagctatggactgttaaaacaaacgaatgtgtggctacttatgatcaa
catgaggacaagatttgggcattggctgtaggtaagaagacagaaatgattgcaacaggt
ggtggtgacgcagttattaatttgtggcatgactctacggctgcagataaagaggaagcc
tttcgcaaagaagaggaaggtgttttgagggggcaagaactagaaaatgctgtttttgat
gccgactacatcaaagccatccagcttgcatttgaacttcggagacctcacaaactcttc
gagttatttagtgagctctgcaggaaggcggatggcaaatctcagattgaaaaagctctg
ggtcctcttaccaaggaagagttgcacaaacttctggagtatataagagattggaatacg
aagccaaaactatgtcacatagcgcactctgtgttgtctcgtttatttagcgccatcccg
cctacagaaattattgagataaagggcatcggggaactgcttgaaggtcttattccttat
tctcagaggcattttagtagagtagacaagttggaaagcaacactttcctctttgactat
acactagctgatatgtcagttctcgaacctgaaggaatggatacagggtcaagagatgaa
gatatgaatcactctgacattacggaagaagagcctataccagctgcagtttcatcaaga
aagaagcggaaatcgcagaaatctcaagacgagcaacagaaaaaatcgaaggtggcttac
aaaagcgttgctgccactgccatatag

DBGET integrated database retrieval system