Primulina tabacum: 142532860
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Entry
142532860 CDS
T11246
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
ptab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142532860
04120 Ubiquitin mediated proteolysis
142532860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142532860
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142532860
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142532860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
FlxA
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_Vps41
zf_RING_Vps8
zf-RING-like
zf-HC5HC2H
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142532860
NCBI-ProteinID:
XP_075495494
LinkDB
All DBs
Position
18:complement(20740064..20744679)
Genome browser
AA seq
541 aa
AA seq
DB search
MMKLRTYAGLSLIATLAVIYHSFNSRGHFYPAMVYLSTSKISLVLLLNMCLVIMCILWQL
TKKIFLGSLREAEIERLNEQSWREIMEILFAITIFRQDFSVTFLGMVTALLLIKSLHWLA
QKRVEYIETTPSVPVRSHIRIVSFMGFLLLIDSIFLYNSIKYLVETRQASVSLFFSFEYM
ILATTTVSTFIKYIFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLTMYMCFFLVIFVNYG
VPLHLIRELYETFRNFKTRVADYIRYRKITSNMNDRFPDATSEELSASDATCIICREEMT
MAKKLLCGHLFHVHCLRSWLERQNTCPTCRALVVPSENGTSTSGSRADGHQQGVSASGTS
SQASSAGVGVANDNVSQHQSRLQAAAAAASIYEKSFVYPSPNTLMWSTGYALLPQTIGRS
SNTSMTNDAAGTSTSGLPQQYQFLNTTFAQSPQCTFVPSQFLGFNGQVGIGSASEAPLDL
QMKLIENQIEFLQLQLQHLQASNCEKTMDQGSSDVKGKSASSPSSSVVDSTSETGNPLCT
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttgagaacctatgccgggcttagcttaatagctacattggctgttatttac
cattcctttaacagtagagggcatttttatcctgcaatggtttatttgtcaacttcaaag
atcagtttggtgcttcttttgaatatgtgtctggttattatgtgtattttgtggcaattg
accaagaaaatcttcctgggttcactccgagaagctgaaattgaaaggctgaatgagcag
tcttggcgggaaatcatggaaatactttttgcaatcactattttcagacaagatttttca
gtgacatttcttgggatggtgacagctttacttctgatcaaatctttgcattggttggcc
caaaagagggttgaatacattgaaactactccatctgtaccagtgagatctcatattcgc
atcgtatcatttatgggattcctcctcctcattgacagtatctttctgtacaattcaata
aaatatttggtggaaacaagacaagcctcagtttcactctttttttcattcgaatacatg
atactggccacaacaactgtatcaaccttcatcaagtatatattctacgtcagtgacatg
ctaatggaaggacaatgggaaaagaaggctgtctacaccttttacttggagcttatccgt
gacttgctccacttgactatgtacatgtgtttcttccttgtcatttttgtgaactatggt
gtgcctcttcacttgatccgagaactttacgagaccttccgaaactttaaaacccgtgtg
gctgattacatacgttaccgaaagatcacttcaaatatgaacgatcgatttccagatgca
acctctgaagaactcagcgcaagtgatgctacatgcattatatgtcgcgaggagatgact
atggccaagaaacttctttgtgggcatcttttccacgtacactgcctgagatcgtggtta
gaaagacaaaacacgtgccctacttgcagagctctagttgtaccttctgagaatgggaca
tctacctctggatcaagggcagatggccatcagcaaggtgtcagtgcatctggtacttcc
tctcaagcgtcttctgctggtgtaggcgtggcaaatgataatgtcagccagcatcagtct
agacttcaagccgccgccgccgccgcatcaatatatgagaaatcttttgtttatccttct
ccaaatacactgatgtggtcaactggatatgctttacttcctcaaacaattggacgttct
agcaacacatcaatgacaaatgatgctgctggaacctctacaagtggactgcctcaacag
tatcagtttttaaacacaacatttgctcagtcaccacagtgcacttttgtcccttcacag
tttctgggttttaacgggcaagttgggataggaagcgcatcagaggcaccactagattta
caaatgaaattgattgagaatcagattgagtttcttcaactgcagctccagcacctacag
gcgtcaaattgtgaaaaaacaatggatcaaggctcatctgatgtgaaggggaagtcagca
tcatcaccatcttcatctgttgtcgactctacaagtgagactgggaatccattatgtaca
gcctaa
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