Primulina tabacum: 142532907
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Entry
142532907 CDS
T11246
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142532907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142532907
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142532907
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
142532907
NCBI-ProteinID:
XP_075495567
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Position
18:complement(31122652..31125996)
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AA seq
363 aa
AA seq
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MVFRDFGCVSTKDNIDGGMGGPCEGLRISDWKDIPAELLLRILSLVDDQTVIVASGVCHG
WRDAISWGLTHLSLSWCKKDMNDLVLSLVPKFTKLQVLILRQDSPQLLDDAVETIAQYCS
DLQELDLSKSFRLTDRSLYALAHGCPNLLKLNISGCSAFSDSAVGYLSGFCRKLKSLNLC
GCAKAASDRALKAIGSNCNNLQSLTLGWCDRVGDEGVKSLAYGCPGLRALDLCGCVLITD
ESVIALANNCLHLRSLCLYYCQYITDKAMYSLAQRRVKNKHEMWTSARTNRQEEEGLTNL
NISQCTALTPPAVQALCDSFPALHTCPGRHSLIISGCLNLTSVHCACGVQTHRPAHAVPH
LAH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcgtgattttggctgtgtgagtactaaggataacattgatgggggaatgggc
ggtccatgtgaaggattaagaataagtgactggaaagatattccagcggagctgttgctg
aggattctttctttagtggatgatcagacggtcattgtggcatctggggtttgtcatggc
tggagagatgccatttcatggggccttactcatctctccttgtcctggtgcaagaaagac
atgaatgatcttgtgctatcactagttcccaaattcaccaaactccaggttctaatcctt
cggcaagattcacctcagctcctagatgatgctgttgagacaatcgcacaatattgtagt
gacctgcaagagttggatctcagtaaaagctttagactaacagatagatcgttgtatgcc
ttggctcatggttgcccaaatcttttaaagctgaacataagtggttgttcggcctttagt
gattccgctgtgggatatttatccgggttttgccggaagttgaaatccttgaatctttgt
ggatgtgcgaaggcagcatctgatagggctttgaaggcgattggatccaactgtaataat
ttgcaatcattgactcttggatggtgtgatcgtgttggtgacgaaggggtaaagagttta
gcatatggttgccctggcctcagagctcttgacttatgtggatgtgttctaataacagac
gagagcgtgatagcactggcaaacaactgccttcacctaagatccctgtgcttgtattat
tgccagtacatcaccgataaagcgatgtattctctagcacagaggcgagtgaaaaacaag
cacgagatgtggacatccgctagaacaaacaggcaggaggaagaaggcctcacaaacctg
aatatcagccagtgcaccgcccttactcctccagctgtacaggccttatgcgactcattt
ccggctcttcatacatgccctggtcgccattcactgattataagcggctgtctgaactta
acatcagtgcattgcgcgtgtggtgtccagacgcaccgtcccgcacacgccgtgccgcac
ctagctcattaa
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