Primulina tabacum: 142532989
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Entry
142532989 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142532989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142532989
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142532989
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
142532989
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
142532989
NCBI-ProteinID:
XP_075495674
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All DBs
Position
18:3512120..3514732
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AA seq
316 aa
AA seq
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MATIEMENVECVSASDVIEDEEIQSSVSSHPHPQQYSSKPRNVVPTSVHELLECPVCTNS
MYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLDLPCKYYSLGCP
EIFPYYNKLKHEGVCNFRPYNCPYAGSECAVTGDIPYLVAHLRDDHKVDMHTGCTFNHRY
VKSNPREVENATWMLTVFNCFGQCFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSL
EVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWK
EQQNPEVGVCIPNLCS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattgaaatggaaaatgtggagtgcgtatctgcatcagatgtcattgaagat
gaagagatccagtcatcggtgtcttctcatcctcatcctcagcagtattcctcaaagcct
cgtaatgtagttcccacaagcgttcatgaattgctggaatgtcctgtttgcaccaattcg
atgtacccaccaatccaccaatgtcacaatgggcatactctctgttcgacttgcaagaca
agggtgcataatcgatgtcctacatgcagacaagagcttggggatatcaggtgcttagca
ttagaaaaagttgcggagtcacttgacctgccatgcaagtactactcattgggatgccct
gaaatatttccttattacaacaaactcaaacacgagggagtttgtaatttcagaccctac
aattgtccgtatgccggatcagaatgtgcagttacaggagacattccatatcttgtcgct
catttgagagatgaccacaaagtggacatgcacacaggatgcactttcaatcaccgctat
gttaagtcaaatccccgtgaagtagaaaatgctacatggatgttgacagtattcaattgt
tttggacaatgtttttgccttcattttgaagcatttcagcttggcatggcccctgtttac
atggcttttctacgctttatgggtgatgaaaatgatgcccgcaactacagctatagttta
gaggtaggagcaaacggcagaaaactcatatgggagggtaccccaagaagcattagagat
agccaccgtaaagtcagggatagtcatgatggtcttattattcaacgaaacatggccctt
ttcttctctggaggtgacaagaaggagcttaagctcagagttactggaagaatatggaaa
gagcaacagaatccagaagttggggtgtgcataccaaatctttgtagttaa
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