Primulina tabacum: 142533178
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Entry
142533178 CDS
T11246
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142533178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142533178
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142533178
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GFIT
Motif
Pfam:
F-box_5
Transp_inhibit
LRR_4
LRR_At5g56370
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
142533178
NCBI-ProteinID:
XP_075495963
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Position
2:complement(47217771..47222209)
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AA seq
590 aa
AA seq
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MDPNPKKPNISIPDSTIPNGSTHAYLPFPDEVLEKVLSFIDSHKDRNSVSLVCKNWYNAE
RWTRTNLFIGNCYSVSPEIVARRFPRIKSVILKGKPRFSDFNMLPRNWGADVNPWLVMFA
KVYPFLEELRLKRMTVSDDSLELLAKSFLGFKALSLSSCDGFNDDGLNAIATHCMNLTEL
NIQDNVTEDIGGGWLSCFPDNFVSLEILNFASLNSDVSFDALERLVSRCKSLKVLKVNES
VNLEQLQRLLALAPQLMELGTGSFMQELAPRQCEDLEISFRNCKDLHALSGLWEVTSLYL
PALYEACASLTFLNLSDAALQSVEVSKLLAHCPNLRRLWVVDTVEDKGLEAVGSSCPLLE
ELRVFPADPYDRHHRHGVTDSGFLAVSRGCRKLHYVLYFCRRMTNAAVVTVVQNCPDFTH
FRLCIMNPGQPDYLTNDPMDEAFAAVAKTCTKLRRLSVSGLLTDLTFEYIGKYAKNLETL
SVAFAGSSDWGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLEKYERMRSLWMSACNLTMK
GCMLLARKMPRLNVEVIKDEESDDSQADKVYVYRSIAGPRQDAPPFVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaccccaagaaacccaatatttcaataccagattcaactataccgaacgga
tcaactcacgcctacttgccatttcctgatgaagtcttggaaaaagttctctcattcata
gattcacacaaggatagaaactcagtctccctcgtctgcaagaattggtataatgcagag
agatggacaagaacaaatctgtttataggcaactgctattctgtatctcctgagattgtg
gctagaaggtttccaagaattaaaagtgtaatacttaaaggaaaacctagattttccgat
ttcaatatgttacctagaaattggggcgctgatgtgaatccttggttggttatgtttgca
aaagtttacccttttttggaggagctaaggttaaagagaatgactgtcagtgatgacagc
ttggagctcttggctaagtcatttctgggcttcaaggctttatctttgtcaagttgtgat
ggtttcaacgatgatgggctcaatgccattgccactcattgcatgaacttgacagagctc
aacatacaagacaatgtaactgaggacattggtggaggttggctaagctgctttccagat
aacttcgtctcattagaaatactaaattttgctagccttaacagtgacgtaagttttgat
gccctcgagaggcttgttagtcgatgcaaatctttaaaagttctgaaggtcaatgagagt
gttaacttggaacaattacaacggctccttgcacttgctccccaattaatggaacttggt
actggctctttcatgcaagaacttgcgcctcgccaatgcgaagatcttgagatttctttt
agaaattgtaaagacctccatgctctttcgggtttatgggaagtcacctctctctatctt
cccgcactttacgaagcttgtgccagtctaactttcttgaacttaagtgatgctgctctt
caaagtgtcgaagtttcaaaacttcttgctcactgccccaatttacgacgcctttgggta
gtcgatacggttgaagacaaagggcttgaggctgttggatccagctgccccttgctcgaa
gaactccgagtcttccctgctgatccttatgacaggcatcatcgccacggggtgacagac
tcgggattcttggccgtctctcgtggatgtcgcaaactccactatgtcctttacttttgc
cgtcggatgactaatgccgctgtagtgaccgtagtccagaactgccccgactttactcat
ttccgtctttgcataatgaatcctggccagccagattacctcacaaatgatcctatggat
gaagcatttgcagccgtggctaaaacttgcactaaacttcggaggctatcagtttctggc
cttctgactgatcttacattcgagtatattgggaaatatgccaaaaatctcgagactctt
tctgtggcttttgctggcagcagcgattggggaatgcagtgtgttttagaaggttgtcca
aagctaagaaagctcgagataagagattgcccatttggtaatgctgcgcttctatctggg
ctcgagaaatacgaaaggatgcggtctttgtggatgtctgcctgtaatttaaccatgaag
gggtgcatgctgctagcaagaaagatgccaagattgaatgttgaagtaatcaaagacgag
gaaagtgatgacagtcaagctgacaaagtttacgtttatcgttccatagcagggccaaga
caagatgctcctccttttgttctcactctttga
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