Primulina tabacum: 142534088
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Entry
142534088 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142534088 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142534088
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142534088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
KTSC
Di19_C
Motif
Other DBs
NCBI-GeneID:
142534088
NCBI-ProteinID:
XP_075497109
LinkDB
All DBs
Position
2:complement(49077154..49086617)
Genome browser
AA seq
1102 aa
AA seq
DB search
MAEHNPGAETASVRLSQKLRELIARGSLDYNSWKSLILEVENTCQDDIDTISLSYDSFLE
KFPLCHWHLERYAYCKAKLCGTQEAIKIYERGSGLAMFSVGFWVDYFAFGTACFGDPEDI
RKLFGRAVSFVGKDYFCHALWDKYMKYEFNQQGWNFLAQSYIQALRFPTKKLYFYYDNFK
QFVANLEEEIEYEKNDHIEVEKLSGPAAIKISGDEISLVVKDLLGSSDKVLKCKALYRYR
SIGEEFYQESCNLNEKVKCFETNIKRRFFCVTPLDDHQLNNWHLYLDFVEKQENLDWTVK
LYERCLISCASYPEFWMRYVNFLESSGGRELAISALDRATKIFLKNVPDIHLFSARFKEH
LGDVNGACASLQQCDAKTDSIFFEKVVTEANMERRLGNLIKASTTYEEALKTAKEKQKIH
ILPRLYSHYSRFTFMITGCADAARNILINGVKEVPNCRFLFEELINFAMTHEGSNQVNVI
DSIISGAISPGSDEYHGLNAKDRETISLLFLEFMNLCGSVHDVMKAWNRHISLFPQFLRS
EPYKHFASGSFLLNMVQLQVEQGPVNGEIDHTQVMEKLSPQKDNNCKEIAEPVYAKAIVP
SDKDMSQGNEPIDGLSCQSREDKPGPVDVSAKLTESNGNVLISHNSVRDFSCRSKVEKPG
PIVVSAETIDQSAKQALTKCEPANEFGKLTETTDPVDQLSLLDHEFKHQNLPVPLESTNI
LNYREKENQESIPISCDVYKAEVVVSPTSSPIIESPLFHNASEKDGSVSQQNSTITNMPA
DSKEPSKTGVNLIEKVTAPGYTSSGFHERAKDQEQNNHPGNESDSKMLMKQGNIESNSGT
QICGHSAGVIQETTKTDHAGQVCTTVPPSDASAAQSPLLSSPLVSYPQQNVQQNNLPSSQ
DPWQAQQNMAMDQMLQYHYHQQHLGQQHYQQHMQQPLFQLQHQYMNQQQYQQHQQHLQLL
PQQYYGQDQHQITYCEQFHQQLQQHHYYQQNQQLQHGQDPHQLQEFAYDMNQQGYQQHVA
TQGQQIPLLQYQQHQQTYQHFHQQQSHGGHPHGPEHLRQQDEQFHKQQELSSGQTMSRKQ
EVPKNAPPNHDGASESCKSPHI
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacataatcctggcgctgaaacggcatcagtgaggttatctcaaaagctcagg
gaattgattgctcgtggctcgctagattacaattcctggaaatcgttgattttagaggtt
gaaaatacttgtcaggatgatatagatacaatttccctgtcatatgattcttttttggag
aaatttccgttgtgtcattggcatttggaaagatatgcctattgcaaggcaaagctttgt
ggtactcaagaagccattaaaatttatgaaagaggatcgggattggcaatgttctcagtt
ggtttctgggttgactattttgcatttggcacagcttgttttggagatcctgaggatatt
cgcaaattatttggaagagccgtctcctttgttggaaaagattacttttgtcacgcccta
tgggacaagtacatgaaatatgaattcaaccagcagggatggaattttcttgcacaaagt
tacatccaagctctgaggtttccaacaaagaagctgtatttttattatgataatttcaag
cagtttgtggccaatttggaagaggagatagaatatgagaagaacgaccacattgaagta
gagaaactttcaggtcctgcagcgataaaaatatctggggatgaaatctctcttgtcgtc
aaggatttgctgggttcttctgataaagtcctcaagtgcaaggcgctgtatagatataga
tctattggtgaagaattctatcaggaatcatgcaatttgaatgaaaaagtaaaatgcttt
gagacaaatataaaaaggcgatttttttgtgttactcctcttgacgaccatcaattaaat
aattggcatctgtatcttgattttgtcgagaagcaagaaaatttggactggactgtaaaa
ctgtatgagaggtgtttaatatcttgtgcgagttaccctgaattctggatgcgttatgtt
aattttctggaatctagcggagggcgtgagctggctatctctgctctagaccgggcgaca
aaaatatttttgaagaatgtgccggatatacatctattcagtgcaaggtttaaggagcac
ctaggagatgtgaatggtgcttgtgcttcattgcagcagtgtgatgcaaaaactgattcc
atcttttttgaaaaagttgtaacagaagcaaacatggaaagacgcctgggaaatttgatt
aaagcttctactacatatgaagaagcgctcaaaacagcaaaagagaagcagaagattcat
attcttcccaggctgtattctcattattcccgattcaccttcatgataacaggttgtgca
gatgctgctagaaatatactaataaatggtgtaaaagaagtacccaattgcagattcctt
ttcgaggaattgataaattttgcaatgacccatgaagggtcaaaccaagtgaatgtgatc
gactcaatcatatcgggtgccatttctccaggatcagatgaataccatggtttgaatgcc
aaagatcgagagactatatcgctcttgttcttagagtttatgaatctttgtggaagtgtg
catgatgtgatgaaggcgtggaaccgtcatattagcctatttccgcagttcctgaggagt
gagccttataaacactttgcatcaggcagttttttgttgaacatggtccagcttcaagtt
gaacaaggtccagtgaatggtgaaatcgaccatacccaggttatggaaaagctgtcacct
cagaaggacaacaattgcaaggaaatagcagaaccagtgtatgctaaagctattgttccg
tctgacaaggatatgtcacaaggcaatgagccaattgatggtttgtcatgtcaatcaaga
gaagacaaaccaggaccagtggatgtaagtgcaaaattaactgagtccaatgggaatgtt
ttgatctcacacaattcagttcgcgatttctcatgccggtctaaagtagaaaaacctgga
cctattgttgtttctgctgaaaccattgaccagtccgcgaagcaagctttgaccaaatgt
gagccggctaatgagtttggcaagttaacagaaacaactgatcctgttgatcaacttagc
ctgttggatcatgagttcaaacatcagaatctgcctgttcctttggaaagtactaatata
ttaaattacagagagaaggaaaatcaggagtcaatccccatatcttgtgatgtgtataaa
gctgaggtagttgtatctccaaccagcagtccgattattgaatctccactctttcataat
gcatcagaaaaagatggatcagtgagtcagcagaacagtactataacaaatatgcctgca
gattcaaaagagccttctaaaactggtgtaaacttgattgagaaagtcacagctcctgga
tatactagttcagggtttcatgagcgagcaaaagatcaagagcaaaataatcatccaggc
aatgaatcggacagcaaaatgctgatgaagcaaggaaatattgagtcaaattcaggaacg
caaatctgtggccattcagcaggggttattcaggaaactacaaaaactgaccatgccggg
caagtatgtacgacggttccaccaagcgatgcatctgctgcacaatctcctctactgtcc
tctcctctggtttcttatcctcaacaaaatgtgcaacaaaacaatttaccaagcagtcaa
gatccttggcaagcccaacagaacatggctatggaccagatgctacagtatcattaccat
cagcagcatttggggcaacagcactatcagcagcatatgcaacagcctttatttcaactg
caacaccagtatatgaaccagcaacaatatcaacagcatcagcagcacttgcagctgttg
cctcagcaatattatggccaagatcagcatcagataacatactgtgaacaatttcaccaa
caattgcaacaacatcattattaccagcagaatcaacaattacagcatggtcaggatcct
catcaacttcaggagttcgcctacgatatgaatcaacaaggatatcagcaacatgttgca
acacaaggacagcagatacctttgctgcaataccaacagcatcaacagacttatcagcat
tttcatcagcagcaatcacatggagggcatccccacggtccagaacaccttcgtcagcaa
gatgaacaattccataaacaacaagaactcagttcaggacaaactatgagcagaaaacaa
gaggttcctaagaatgccccaccaaatcatgatggtgcatctgaatcgtgtaaatctcca
catatttaa
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