Primulina tabacum: 142534392
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Entry
142534392 CDS
T11246
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
ptab Primulina tabacum
Pathway
ptab03420
Nucleotide excision repair
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142534392
09124 Replication and repair
03420 Nucleotide excision repair
142534392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142534392
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142534392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142534392
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
142534392
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
142534392
TCR (transcription coupled repair) factors
Cul4-CSA complex
142534392
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142534392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ORC5_lid
Motif
Other DBs
NCBI-GeneID:
142534392
NCBI-ProteinID:
XP_075497372
LinkDB
All DBs
Position
2:49315240..49323399
Genome browser
AA seq
838 aa
AA seq
DB search
MSQPSTSTSASAKVCKRSSPYSSSSPTTTVGGGAASIFPAMKKAKSQAVASSVDGNKNGQ
QHINPHLHFSESTMIENDPNDVVLEPSAASGAFSGRVGAGGGGITANLARKKATPPQPTK
KLVIKLVKAKPTLPTNFEENTWATLKSAISAIFLKRPDPCDLEKLYQAVNDLCLHKMGGS
LYQRIEKECEAFINTALQSLVGQSEDLVVFLSLVEKCWQDFCDQMLMIRGIALYLDRTYV
KQTPNVCSLWDMGLQLFRKQLSLASEVEHKTVFGLLKMIESERLGEAVERTILNHLLKML
TALGIYPESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEMRLQEEHDRCLLYVDAS
TRKPLVATAERQLLERHISAILDKGFMMLMDGKRIEDLQRMYSLFSRVNALESLRQSLNQ
YIRRTGQTIVIDEEKDKDMVSCLLEFKANLDMIWEESFSKNEAFSNTIKDAFEHLINLRQ
NRPAELIAKFVDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLL
LGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGI
EMSVHVLTTGYWPTYPPMDVRLPRELNGYQDIFKEFYLSKYSGRRLMWQISLGHCVLKAE
FPKGRKELSVSLFQTVVLMLFNDAQNLSFQDIKESTGIEDKELRRTLQSLACGKFRVLQK
IPKGRDVEDDDSFVFDDQFTAPLYRIKVNAIQMKETVEENASTTERVFQDRQYQIDAAIV
RIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccctccacctccacatccgcctccgctaaagtctgtaaacggtcatctcct
tattcttcctcttcccccacaactactgtaggaggcggcgcagcttcaattttcccagca
atgaaaaaggccaagtcacaggcagttgcatcctctgttgatggtaacaagaacggacag
cagcatattaatcctcatttacacttctctgaatccacaatgatcgaaaatgatcccaac
gacgttgtattggagccatctgcggcctccggcgctttcagcggccgcgttggcgctggc
ggaggaggaattaccgctaatcttgctaggaaaaaggccacgcctccgcagcctacgaaa
aagcttgtgattaagctcgttaaagctaaaccgacgctgcccactaattttgaagaaaat
acatgggccaccctcaagtcagctatcagtgccatatttttgaaacggccagatccttgt
gacttagagaagctatatcaggctgtcaatgacctttgcctgcacaagatgggggggagt
ctttatcagcgaattgaaaaggagtgtgaagctttcattaacaccgctttacaatccttg
gttggtcaaagtgaagatctggtagttttcctatctctggttgagaagtgctggcaggat
ttttgtgatcaaatgctgatgattcgtggtatagctctatatctcgatagaacatatgtg
aagcaaacaccgaatgtgtgttcattgtgggacatgggtttgcagcttttccgcaaacag
cttagtctagcttcagaagtggagcacaaaactgtattcggtctgttaaaaatgattgag
agcgaaagattgggtgaagcagtcgaaagaactatccttaatcatctgttgaagatgttg
actgcacttgggatttacccagaaagttttgaaaagccatttcttgaatgtacatctgag
ttctatgctgctgaaggagtcaaatacatgcagcagtctgatgttccggattatttaaag
catgtcgagatgaggttgcaagaagaacatgatagatgcttgctttatgtagatgcaagt
actaggaagccattggtagctacagcagaaaggcaactacttgaacgtcacatatctgcg
attctcgataagggtttcatgatgctgatggatgggaagcgtattgaagatcttcaaaga
atgtattcgcttttttccagagttaatgcccttgaatcattaagacaatctcttaatcaa
tacatccgaagaacgggccaaaccattgtcattgacgaagagaaggacaaagatatggtg
tcctgcttactggaatttaaggcaaaccttgacatgatatgggaagaaagtttctctaaa
aatgaggcatttagcaatacaataaaggatgcatttgagcatctcattaatctccgtcag
aaccggcctgctgagttaattgccaagttcgtggatgagaagctccgagctggaaataag
ggtacatcagaggaagaattggagggtacactggacaaagtcttggttttgttcagattt
atacagggtaaagatgtatttgaagcattctataaaaaagatcttgctaaaaggctcttg
ttgggtaagagtgcttctattgacgcagagaagtctatgattaccaagttgaaaacagaa
tgtggcagtcagttcactaacaaacttgaaggaatgttcaaggatattgaattgtcaaag
gaaattaatgaatcattcaagcaatcatcccaagctcggacaaaactcccatctggaatt
gaaatgagtgtccacgtcttaacaacagggtactggccaacctatccacccatggatgtc
aggctgccccgtgagctcaacggttatcaggatatatttaaggagttttatttgagcaaa
tacagtgggaggcggctaatgtggcaaatttcattgggtcattgtgtactaaaagcagaa
tttccaaaaggtagaaaggagctttcagtttctctatttcagactgtcgtcttgatgctg
ttcaatgatgcccaaaaccttagctttcaagatatcaaggaatcaactggtattgaagat
aaagagctgagaagaactttgcagtcccttgcatgtggaaaattccgtgttcttcagaaa
attcccaaagggagagatgtggaagatgatgactcctttgttttcgatgatcaatttact
gcacctctgtatcgtatcaaggtaaatgccattcagatgaaggaaacagtggaggagaat
gccagtacaacagaacgggtcttccaagaccgtcaatatcagattgatgcagctattgtt
cggattatgaagacaagaaaagttttaagccacaccctcctgataactgaactatttcaa
cagctcaagtttcccataaaaccagccgacttgaagaaaaggattgaaagtctcattgat
agagaatacctggagcgcgacaagaacaacccacaagtgtacaactaccttgcataa
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