Primulina tabacum: 142534431
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Entry
142534431 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC142534431
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142534431
09122 Translation
03013 Nucleocytoplasmic transport
142534431
03015 mRNA surveillance pathway
142534431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142534431
03041 Spliceosome [BR:
ptab03041
]
142534431
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142534431
Spliceosome [BR:
ptab03041
]
Complex C
Other components
EJC/TREX
142534431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
142534431
NCBI-ProteinID:
XP_075497413
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MSSPYVTLGNRPLDQWKVTELKEELKRRKLTIKGLKEDLIKRLDEAVRSDLESAKESTDN
NLNEENQSELPSEQATEGYIVSGRSKDLADTGDNLIGRPNNSPEIGIDHDSGLVSEGKDL
EVNLGQEVNTVEVVGEQVSQFTTVETAVVLSETIEPAESLTGSVSHNLGQDKEVDLTRGV
NHDGVESRHEDVIPEFSDPYIHMPLIDESSTTMVPPGGVSVKGSEVQNEATVSLDPPEID
TPEGPRPDHKVQQLKYQVSEVENPHLGSEVITDTVSTESVSIIEKNELKLDVVNDSVLEL
DVDCEIPPPPSTFTPDDGETHPMDVEEPPLDKKVENKEIHGHNYETVDSPKNIDGDELGP
EKLSLDRSSGDDSMEEDVLEIKQMECKSVSDQTRDLVEKSELPIVEEDNIVDVVGGDKTI
EAIVDDAETRKLLETSMKRKFDGDDNEAVGNNDTGKRPHRWKVGGLRGSEQERRNSETLK
TPKGSSQDSQTSIKRFNISDSTNNEAPKERLVPPSPKALSNSLRIDRFLRPFTLKAVQEL
LGKTGTVTSFWMDHIKTHCYVSYSSIEEAVDTRNAVYNLQWPPNGGRMLVAEFVDPQEVK
THVEAPPASSTTPSSSGPSTFSTSEPPLQPQPSPRQQVPTLQLPPLSLPPPPPLANAAAV
RERQHPSRVPLPREQLHLHPARDHPNLPPPVLPEKTDPPIVTLDDLFRKTISTPRIYYLP
LSDEQVAAKLNSQGKNV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatatgttactcttggaaatcgaccactggaccaatggaaggtcaccgag
ctgaaggaagaacttaagagacgtaaattgactattaaggggttgaaagaagatttaata
aagcgtttggatgaagcagttcgtagtgatttggaaagtgctaaggagagtactgataac
aatctaaatgaggagaaccaatctgagttaccttctgaacaagcaacggaaggttatatt
gtttctggaagatctaaagatcttgcggatactggggacaacctgatagggaggccgaat
aacagccctgagattgggattgaccatgacagcggattagtgagtgaaggcaaagatttg
gaagtgaaccttggacaggaagtcaatactgttgaggttgtaggggagcaggtctctcag
ttcacaacagttgaaactgctgttgtgctcagcgagacaattgagcctgcagaatctttg
actggatcagtgtcgcacaaccttggacaagataaggaggtagatctaaccagaggagtc
aaccacgatggagtagaatcacgtcatgaggatgttattcctgaattttcagatccctat
attcatatgcctctgattgatgaaagcagcacgaccatggtacctccaggtggagtaagt
gtaaagggtagtgaagttcagaatgaagccactgtttcactggatccgcctgaaattgat
acccccgagggtccccgaccagatcacaaggtccaacaattgaagtatcaggtatctgag
gttgaaaaccctcatttagggtctgaagtaataactgatactgtttctactgaatctgta
tccattattgagaaaaatgaactaaagcttgatgtagttaatgatagtgtattagagctt
gatgttgactgtgagattccccctccacccagcacttttacccctgatgatggagaaaca
catccaatggatgtagaagagcccccactcgacaaaaaagtagaaaacaaagagattcat
ggccataattatgaaactgttgacagtcctaagaacattgatggagatgaattgggtccc
gaaaagctgagtttagaccggagttctggtgatgattccatggaggaggatgtattggag
attaagcaaatggagtgcaagtccgtttctgatcaaacaagagatctggtggaaaaatct
gaactgcctattgttgaggaggataatattgttgatgtagttggtggtgataagacaatt
gaagctattgttgatgatgctgaaacaaggaagttactggagacatctatgaaaaggaag
tttgatggtgacgataatgaagcagttgggaacaatgacacagggaagagaccacacaga
tggaaagttggtgggcttaggggttctgagcaagaaagaaggaactctgagactctcaag
acccctaagggttcatcgcaagattctcaaacttccatcaagcgcttcaatatttctgac
tcgaccaataatgaagcaccaaaagaacggcttgttcctccgtcaccaaaggccctcagt
aactctctcagaattgatcgatttctgcgcccttttactttaaaagcagtgcaagaactt
cttggaaagacgggtactgttaccagtttctggatggatcacattaaaacccactgctat
gtctcctattcatccatcgaggaagctgtagacacccgtaatgctgtttacaatctccag
tggcctccaaatgggggacgcatgttggtagcggagtttgttgatcctcaagaagttaaa
actcatgtggaggctccccctgcatcttccacaacaccctcaagcagtgggccttctact
ttctcaacctctgaaccgcctttgcaacctcaaccttctccacgccaacaagttccgacg
ctgcaacttccacctctttctcttcctccaccaccgccactggctaatgcagcagcagtt
agagaacgccagcatccatcaagggtacctctaccaagagaacagctgcacctgcaccca
gctagggatcaccctaaccttccaccccctgtacttcctgagaaaactgacccaccaatt
gtaactttagatgatcttttccggaaaactatttcaacccctcgcatctactacttgcca
ttgtctgatgaacaagttgcagcaaagctcaattctcaggggaagaatgtttag
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integrated database retrieval system
