Primulina tabacum: 142534553
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Entry
142534553 CDS
T11246
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ptab Primulina tabacum
Pathway
ptab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142534553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142534553
03036 Chromosome and associated proteins [BR:
ptab03036
]
142534553
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
142534553
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
142534553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_Aladin
WDR55
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
142534553
NCBI-ProteinID:
XP_075497542
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MGSSTQESHLRSETCVTYDSPFPIYAMAFSAADRRHIAVGSFVEEFDNRVDILCFDDECY
SIKPIPALSVPHPYPATKLMFHPSPATGNLLASSGDYLRLWEIRDASIEPISTLDNSKTS
DYCAPLTSFDWNEVEPHRIGTSSIDTTCTIWDVEKGVVETQLISHDKEVYDIAWREAGVF
GSVSGDGSVRLFDLRHKERSTILYESPKPETPLSRLAWNKQDLRYMATFLMNSNKILILD
TRYPTVAAAELERHQGCVNAIAWAPLSCRHISSGGDDGQAFLWELPILSGTNGIDPMYMY
SAGSEINQLHWSAAQPDWIAVALENKMQMLKV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggtagttccacccaagaatcccacctcagatccgaaacttgcgtcacgtatgactca
ccctttcccatctacgccatggcgttttccgccgccgaccgccgccatatcgccgtcggg
agtttcgttgaagaattcgacaaccgcgtcgacattctctgcttcgacgatgaatgctat
tccatcaagcctatacctgcactatcggtccctcacccctaccccgcaactaaactcatg
tttcacccctcaccagctactggcaacctccttgcttcctccggagactacctacgcctc
tgggaaatccgggatgcttcaatcgaacccatatctacgctcgacaacagcaaaactagc
gactactgtgctcctctaacttcattcgattggaatgaggtggagccccatcgaatcgga
acatcaagcatcgacactacctgcaccatatgggatgtggaaaagggcgttgtggaaacc
caactgatttcccacgataaagaagtgtacgatattgcctggcgcgaggcaggagttttt
ggatcagtttcaggagacggatcggtcaggcttttcgatctaaggcataaggagcgctcc
acaattctttatgaaagcccgaagccggaaacgccgctatcgaggctggcttggaataag
caagatttgaggtacatggcgacgttcttgatgaatagcaataagattttgatactggat
acgaggtatcctacagtggctgccgctgaattagaaaggcaccaggggtgtgtaaatgca
attgcttgggccccgctgagttgtaggcacataagttctggtggggatgatgggcaggct
tttctttgggagttgccgattctttctgggacgaacgggattgatcccatgtatatgtac
tcggcaggctcggagatcaatcagcttcactggtcggcggcgcagcctgactggattgct
gttgccctggaaaataagatgcagatgctcaaggtttga
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