Primulina tabacum: 142534577
Help
Entry
142534577 CDS
T11246
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142534577
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
90S particles
Other 90S particles
142534577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
WD40_like
DUF3752
Motif
Other DBs
NCBI-GeneID:
142534577
NCBI-ProteinID:
XP_075497557
LinkDB
All DBs
Position
2:complement(49459479..49464646)
Genome browser
AA seq
513 aa
AA seq
DB search
MKGKHLKKKKPLDQQNKGKISNKKQFSVTRDPFFEDSDPKRRRKFRNGGDENIESSDDEG
EALDSDGDRGRAEEMEEEIEETPAEKRKRLAYAILEKRRKVEEDVLEDGEEARTEREGER
DSLIAKLLQQEQLEESGRLRRAIGARVQKPEPSVGFRLLVKHQQPVTAVALSEDDSRGFS
ASKNGTIEHWDIINGKTEKYTWPSDEVLKSHGVKDPQGRATKHSKHVLALAISSDGRYLA
SGGLDRHVHLWDVRTREHIQAFPGHKGPVSCLTFRQGSSELFSGSFDRSLKIWNAEDRTY
INTLFGHQSEVLTIDSLRKERVLTVGRDRTMHLWKVPEESQLIFRASASSLECCCFISND
EFLSGSDDGSIEHWNVLRKKPVHIVKNAHTSSTVPSYENNGLSNGHKENNALDLEKSGST
ALSWINSITVCRNSDLAASGAGNGLVRLWKIENESKGISPLFELPLVGFVNSLTFAKSGK
FLIAGVGQEPRLGRWGRISAARNGVSVHPLVLS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaagcatttgaagaagaagaaacctttggaccagcagaacaagggcaagatt
agcaataagaagcagttctccgttacacgggatccatttttcgaagattctgatccgaag
cggcgccgtaagtttcgcaatggaggtgacgaaaacattgaaagcagtgatgatgaagga
gaagcacttgattcggatggtgatagggggcgagcggaggagatggaagaagagatagag
gagacgccggcggagaagaggaagcggttggcgtacgcaatcttggagaaaaggagaaaa
gtagaagaagatgtattggaggacggggaggaagctcgtacggagagggagggagagagg
gattcacttattgcgaagcttttgcagcaggagcagctggaagagagcggccgcctccgc
agagctattggggcaagggttcaaaagccagaaccaagtgtgggattccggcttcttgta
aaacaccagcaacctgttactgctgtggctctatctgaggatgactcgagaggattttca
gcttccaaaaatggtaccattgaacattgggatattattaatgggaaaactgaaaagtat
acctggcctagtgatgaagttctaaagtctcatggcgtaaaagacccacaaggtcgagct
actaagcatagtaaacacgttttagcactggctattagctctgatgggcggtatttggct
agtggaggcttagatcgacatgttcatttgtgggacgtgcgcacacgagagcatattcag
gcttttccaggacacaaaggacctgtctcttgcttaacatttagacaggggtcttcagaa
ctcttttctggttcatttgatagatctttaaaaatttggaatgcagaagatagaacttac
ataaacacattgtttggacaccaaagtgaggtgttaacaattgacagcttgaggaaagaa
cgtgtattgactgttggacgtgaccggaccatgcacttgtggaaggttccggaggaatca
caattaatatttcgggcttctgcgtcttcccttgaatgctgctgctttattagtaatgat
gaattcctgtctggttccgatgatggaagcatcgagcattggaatgtactgcgcaagaag
cctgttcatatcgtaaaaaatgctcatacctcaagtactgttcccagttatgaaaataat
ggactatcaaatggccataaagaaaacaatgccctagatttagagaaaagtggttccaca
gctctttcttggattaattcaatcactgtatgcagaaacagtgatcttgctgcttcggga
gctgggaatggtttggtacggctttggaaaattgagaacgaatccaaaggcatatctcct
ttgtttgagctccccctggtcggatttgtaaattctctgacttttgcaaaatctggaaaa
tttctcattgccggagttgggcaggaaccacggttaggtaggtggggacgtatttctgcc
gctagaaatggagtttcagtacacccgctcgtgctttcatga
DBGET
integrated database retrieval system
