Primulina tabacum: 142535635
Help
Entry
142535635 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142535635 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142535635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142535635
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142535635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Vps36-NZF-N
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
142535635
NCBI-ProteinID:
XP_075497941
LinkDB
All DBs
Position
2:50387245..50392991
Genome browser
AA seq
778 aa
AA seq
DB search
MPRQAGYSVDYDDAYDVYDYEYEDGYDELEENGPSRTKAKEEILKTGVWRCPVCTYDNED
SMSMSSCDICGVLRNLLLKDNTRRKATADLFHAVCGTCKVSGASIMARSLFASSRKQTPI
NSALFDAQGNVFPPKIISTSCENGNIHADFLELNRAFSSGASIMARSLFASSRKQTPINS
ALFEEQENVFPPKIIFTSCENGNNRADFLELNRAFSSQKFHKVTSAPFKFDSPSPDDLVS
NGLRSLKLYSKGTKMVVESEVAAKGHNSSSSLVSRKKHTGVEEKELASCSGNKLVISDDS
ANNVSSNNVSLPSKSGNTKFTSDHKATSIPRYKLEKWMSPDNVDDGLSQLNLAIVGHVDS
GKSTLSGRLLHLLGKISRKEMHKNEMEAKQQRKGSFAFAWALDESVEERERGITMTVGVA
FFTSRRFRVVLLDSPGHRDFVPNMISGASQADAAILVVDASMGSFEAGVDAVGGQTREHA
QLIRSFGVNQIIVAVNKMDVVNYSKERFDVVKQKLGTVLRSCGFKDSFISWIPVSAMENQ
NLLNPSDLMSSWFKGNFLLDAIDSLQLPARDYSKPPLMPICEVMKSLSQSPGQVSACGKL
ESGAIRSGLKVLIMPSREIATIRSLERDSQVCDIAKAGDNVTVNLQGIEGNHLTNGGVLC
HPDFPVPVANHLELKIFVLDISTPILIGSQLEIHIHHAKGAARVVKLSSLLDPKTGKITK
KLPRCLLAKQNAVVEVVLQETMCAEEYSKCRALGRASLRVLGRTIALGVVTQIINKEP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcaagcgggctacagtgttgattatgatgatgcatatgatgtctatgattat
gaatatgaagatggttatgatgaattggaagaaaatggtccctctcgcacaaaggcaaaa
gaagagatcctcaagactggggtctggcgttgcccagtttgtacatatgataatgaagat
agtatgtctatgtcttcatgtgacatctgtggagttttacgcaacctcttgctcaaagat
aataccagaaggaaggccactgcagatcttttccatgcagtttgtggcacatgcaaagtt
tctggagcatcaataatggccaggtctctttttgcatcatcgcggaaacagacacccata
aattctgcactctttgacgcacagggaaatgtattcccaccgaagattatctctacttcc
tgcgagaatggaaatatccatgctgattttcttgaactcaatagggcttttagctctgga
gcatcaataatggccaggtctctttttgcatcatcgcggaaacagacacccataaattct
gcactctttgaagaacaggaaaatgtattcccaccgaagattatctttacttcatgcgag
aatggaaataaccgtgctgattttctcgaactcaatagggcttttagctctcaaaaattt
cacaaagttacttcagcccctttcaagtttgattccccgtctccagatgatttagtatca
aatggtttgcggtcactgaaattgtattccaaagggacaaagatggtagttgaatcagag
gtggctgctaaagggcacaactcctcttcgtctttagtgtcaagaaagaaacacactgga
gttgaagagaaagaattggcttcatgcagtggaaacaaacttgttatttctgatgattct
gcaaacaatgtctcttcaaacaatgtctctttaccttccaaatctggaaacaccaaattt
accagtgatcataaggcaacatcaattccacgatataaactggagaaatggatgagtcct
gacaacgtagatgatggattgagtcaacttaatcttgcaattgttggtcatgttgattct
ggaaaatcaacactttcgggaaggttgcttcatcttttgggaaaaatatcacggaaggag
atgcacaaaaatgagatggaagctaaacaacagaggaaagggtcatttgcatttgcatgg
gcattggatgaaagtgttgaagaaagggaaaggggtataactatgactgtgggtgtagcc
tttttcacttctagaagatttcgtgttgtactgctggactcacctggacatagagatttt
gttccaaacatgatatctggagcaagccaggcagatgccgccattctggtagtagatgct
tcaatgggttcatttgaagcaggtgtagatgctgttggggggcaaacaagagagcacgca
cagctaattagaagctttggagtcaatcaaattatagtcgctgttaacaaaatggatgtt
gtgaactactccaaggaaagatttgatgtggtaaagcagaaactcggaacagttctccgc
tcttgtggttttaaagattccttcatatcatggattccagtgagtgccatggaaaatcaa
aacttgctaaatccatctgatctgatgtcgtcttggtttaaggggaattttttgttggat
gcaatagattctctgcaacttccagcaagagattactccaagccacctttaatgcctata
tgtgaggttatgaaatcactatcacaatcaccaggccaggtttctgcatgtgggaaattg
gagtctggagctattcgatctggtttaaaggtactgattatgccttcacgagaaatagcg
accatcagatctttggaacgggattcccaggtttgcgacattgcaaaagctggtgacaat
gtgactgtaaatttgcaaggtatcgagggcaatcatctcacgaatggaggtgttttgtgc
caccccgacttcccagttccagtcgcaaaccacttggaactaaagatttttgtgctggac
atatccactccaatactaatcggctctcagttggaaattcacatacaccatgcaaaaggg
gctgctagagttgttaagttatcgtctcttcttgatcccaaaactggaaagattacaaag
aagcttccaagatgtttattagctaagcagaacgctgtggtagaggtggttttgcaagag
accatgtgtgcggaagaatatagtaaatgtagagctttgggaagagcatctcttcgagta
ttaggaaggactattgctctcggtgttgtaactcaaataataaataaggaaccatag
DBGET
integrated database retrieval system
