Primulina tabacum: 142536705
Help
Entry
142536705 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: translation initiation factor IF-2, chloroplastic-like
KO
K02519
translation initiation factor IF-2
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptab03012
]
142536705
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142536705
Translation factors [BR:
ptab03012
]
Eukaryotic type
Initiation factors
MTIFs
142536705
Prokaryotic type
142536705
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
142536705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
Ras
IF2_N
Roc
RsgA_GTPase
Arf
Motif
Other DBs
NCBI-GeneID:
142536705
NCBI-ProteinID:
XP_075498098
LinkDB
All DBs
Position
2:complement(51023817..51031635)
Genome browser
AA seq
997 aa
AA seq
DB search
MTCLASLTNLGSVNVKSFGSFDGSVCLVSRLSFPRNLCSCKRFWIGKRWRYAGVCRFSLT
TNYVAEQGTSVSLDSTYEDGKDNGNETFLRAAPRPVLKSGIEPLQSVAWDEPRLREGLGN
KNVNDNERSKMIESLGEVLEKAEKLETGKMADTPMNNQSKNEISKQKNGKMVNEMDKYKT
VKSVWRKGNPVTNVQKVVKEPPKQEPKIIGGGEVTGSQSFSPPRVPQPPQKVQPKLQAKP
SVAPPPFLKKPVVLKDVNAAAKSPVSDESDAGMKMKERKPILIDKFAAKKTVVDPVIAQA
VLAPPKPGKSPVPGKFKDEFRKKSGREGSRRRMVNDDNEILDEDASELNVSIPGAATLRK
GRKWSKASRKAARLRAAQDAAPVKVEMMEVGEDGMLVEELAYNLVVSEGEILGYFYSKGI
KPDGVQKLSKDMVKMVCREYEVEVIDATPVRVEDMAKKKEIFDEDDIDNLKDRPPVLTIM
GHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPIDGKPQTCVFLDTPGHEAFGA
MRARGARVTDIAIIVVAADDGIRPQTSEAVAHAKAAGVPIVVAINKIDKDGANPDRVLQE
LSSIGLMPEEWGGDVPMVKISALKGENVDDLLETVVLVAELQDLKANPDRSAKGTVIEAG
LDKSKGPVATFIVQNGTLRRGDTVVCGEAFGKVRAIFDDQGKKVDEAGPSIPVQVLGLGN
VPLAGDEFEVVASLDIAREKAELRAEYLRTERMTEKAGDGKVTLSSLASALSSGKNAGLD
LHQLNIILKVDVQGSIEAVKQALQVLPQENITLKFLLQATGDVSTSDVDLAVASKAIIFG
FNVKTPGSVKSYADNKSVEIRLYKVIYELIDDVRNAMEGLLDLVEEQVPIGSAEIRQVFS
SGSGRVAGCMVTEGKLVKDCGIRVRRKGKEVHVGVLGSLRRVKEIVKEVNAGLECGIGSD
EFDDWEEGDLVEAFTTVQKKRTLEEASATMSAALEQL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtttagcttccctgacgaatttgggaagcgtgaatgtgaagtcttttggtagt
tttgatggttctgtttgtctagttagcaggttatcttttcccaggaacctttgtagttgt
aaaaggttttggattggtaagagatggaggtatgctggtgtttgtagattttctttaact
actaattacgttgcagaacaaggtacttcggtttctcttgattccacgtacgaagatggt
aaagacaatggcaatgagacatttcttagggcagcccccaggccggttctaaaatcggga
attgaacccctccagagtgtggcttgggatgagcccagacttcgagaaggtttaggcaat
aaaaatgtgaatgacaatgagagaagtaagatgatcgagtcactaggggaggtgttggag
aaggcagaaaagctagagactggcaagatggcggatacgccaatgaataatcagtcaaag
aatgaaatatccaagcaaaaaaacggcaaaatggttaatgagatggacaagtataagact
gtgaagagcgtttggaggaagggtaatccagtgacaaatgtgcaaaaagttgtgaaggaa
cctccgaaacaggaacctaaaataataggtggaggagaggtgactggatctcagtctttt
tctccacctagggtcccccagcctcctcagaaagttcagccaaagttacaggcaaaaccc
tctgtagctcccccgccttttctcaagaaacccgttgtcttgaaggatgttaacgcagct
gccaagtctcctgtttctgatgagtctgatgcaggcatgaagatgaaagagcgcaaacca
attttaatagacaaatttgcggctaagaaaactgtggttgatcctgtgattgctcaagct
gttttagcccctccaaagccagggaagagccctgtacctggaaaatttaaggatgaattt
cgaaaaaaaagtggcagggaagggtctcgaagacgcatggttaatgatgacaatgaaatt
cttgacgaggatgcatcagaactcaatgtttccattcctggggctgccactttgagaaaa
ggaagaaaatggagtaaagcaagccgaaaagctgctagactccgagcagcccaagacgct
gctcctgttaaagtagaaatgatggaagttggtgaagatggcatgttggtcgaagagttg
gcctacaacttggtcgtcagtgaaggtgaaattcttgggtatttctactccaaaggaatt
aaacctgatggtgttcagaagctgagcaaagacatggtgaagatggtatgcagagaatat
gaggtggaagtcattgatgctacccctgtgagggtggaagacatggcaaaaaagaaagag
atttttgatgaagatgacattgacaacttaaaagatagacctcctgttttgaccataatg
ggtcatgttgatcatggaaagacgacgcttttggattacatacggaagagcaaggtggca
gcatctgaagctggtgggataacacaaggaattggggcttataaggttcaagtacctata
gatggcaagccacaaacatgtgtttttcttgatactcctggacacgaggcatttggggca
atgagagctcgtggagccagagtgacagacattgccatcattgtagtggcagctgatgat
ggaatccgacctcaaacaagtgaggctgttgcccatgccaaagcggctggggtgccaatt
gtggtagctataaacaagatagataaggatggagctaacccagatcgagttctacaagaa
ctttcttccattggtttgatgcctgaagagtggggtggcgacgtaccaatggtcaagata
agtgctcttaagggagagaatgtagatgatttactggaaactgtcgtgcttgttgctgag
ttgcaagacctgaaggctaatccagataggagtgctaaaggaacagtgattgaagcaggt
cttgataaatccaagggacctgtggctacctttattgtgcaaaatgggactctcagaaga
ggagatacagtagtttgtggtgaagcgtttggaaaggtgcgggcaatatttgatgatcag
gggaaaaaggtagatgaagctggtccttctattccagtacaggttcttggattgggcaat
gttcctttagctggtgatgagtttgaggtcgttgcatctcttgatattgctcgagaaaag
gcagagttacgagcggagtatttgcgaactgaacgtatgacagaaaaagctggagatggg
aaagtcacgctttcttctttggcatcagctctttcatcagggaagaatgctggattagat
ctgcaccaactcaatataatattgaaggttgatgttcagggatccattgaggccgtaaag
caagctttgcaagtgcttcctcaagaaaacatcactttgaagttcctgctgcaagctact
ggggatgtgagcaccagtgatgttgatttggcggtggcgagcaaagctattatttttggc
ttcaatgtcaaaacacctggttcagtgaagagttacgcagataacaaaagtgttgaaatc
cgtctttataaagttatatatgaacttattgatgacgtgcgcaatgcaatggaggggctt
ctggatcttgttgaggagcaagtaccgattggttcagcagagataaggcaagtatttagt
agtggcagtggccgtgtcgctggatgcatggtgacggagggaaaactagtgaaagattgt
gggattcgtgtacgaagaaaaggcaaagaagttcatgttggtgtcctaggttccttgaga
cgggtcaaggagatagtaaaagaggtaaatgctggacttgaatgcggtattggaagtgat
gagttcgatgattgggaggagggtgatcttgtcgaggcatttaccaccgtgcaaaagaaa
agaacactggaagaggcgtctgccacaatgtcagctgcactcgaacaactgtga
DBGET
integrated database retrieval system
