Primulina tabacum: 142536805
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Entry
142536805 CDS
T11246
Name
(RefSeq) protein PAT1 homolog 2-like isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142536805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142536805
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142536805
mRNA degradation factors
5'-3' decay
Decapping complex
142536805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142536805
NCBI-ProteinID:
XP_075498261
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Position
2:51875244..51884997
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AA seq
756 aa
AA seq
DB search
MERSGGGNFNDSSKASASSVSEGALFDASQYPFLGKDTVDELELGSLKDEVECVHEIGGA
FGGEEELHEYHLFDKDEVKSNKVVSGPRHPGIVGARGSGSEPFSRESPSATEWAPELDFP
DRLDRHMPDTECHEETKRWSLQPYLSTMLLPEHKPLYRISSYPRQQQQQQQLQRFSSEPI
LVTNLSYTSFSPPGSQQASLYNSRHRSLSSLSGGSQPKFSTPNNPPPSSFTQNLPCLPLG
FHYNTHGLLPAQVLPSQQQQQLLHLSFQPSVAHMFVLQSDIYHTFPSPSHFSQYGYYDKR
ESKHKSAQKGRHSVLFSQGYDSSSRRGDSDLPLFKSKHMTVEEIESILRTQHADTHGNDD
PYVNDYYHQACLAKNAAETKSKCRFHPSHQKEQSSRSHNSTDSQPHLHVDALGRVCFSSI
HRPRPVLDVDPPLSACGDGSAEQKLTVRPLEQEPMFAARVTIEDGLCLLLFVDDIDRLLK
FTQPQDGGIQLRRKRHMLLEGLAASLQLVDPFGKSSTSVGFSDKDDIVFLQLVSLPKGRK
LISRFLQLLLPGSELVRIVCMAIFRHLRFLYGVLPPDPEAADSIIDLAKTVSVCVGGMDL
NSLSACLAAVVCSSEQPPLRPVRSPAGDGASVILKSVLERAAHLLKDPQSAMNFSIPNSA
LWRASFDAFFGLLTKYCISKYDSIVRSLTTLSLPNSEVARVVSREMPMELFRASLPHTDE
NRKNILMKFAQRAIPVSRSSNHGGSGGQKNPESVRG
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagagatcgggtggcggaaacttcaatgactccagcaaggcctccgccagttctgtt
tctgaaggagctctattcgatgcatcccagtacccgtttttggggaaagatacagtggat
gaattggagttagggagcctcaaagatgaggtagaatgtgttcatgaaattggaggtgca
ttcggtggcgaagaagagttacatgagtatcatttgtttgacaaagatgaggtcaagtca
aataaagttgtttctggaccaagacatcctggaatagttggtgcccgcggatctggatct
gaacctttctccagggagagtccatcagccacggaatgggcaccagaattggattttcct
gatcggcttgaccgtcatatgcctgacacagaatgtcacgaggaaacaaagagatggtca
ttgcagccctatctttctacgatgcttcttccagaacataaaccattatacagaatatcg
tcataccctcggcagcaacagcagcagcagcagttgcaacgtttttctagtgagcctatt
ttagtcacaaacttgtcgtacacttccttctctccaccaggatctcagcaagcttcgtta
tataattcacgtcatcgttcattgtcatctctttctggtggatcccagccaaagttctct
acaccaaacaaccctccaccatctagctttactcaaaatttaccttgcttgcctcttgga
ttccattataacacacatgggttattaccggcacaggtgttaccctcccagcagcagcag
cagctgctgcatctttcatttcaaccatctgtagcccacatgtttgtattgcagtctgat
atataccacacatttccttcaccatcacacttcagtcaatatggatactacgataaaaga
gagtccaaacataaatcagcgcagaagggtagacattcagtgctattctctcaagggtat
gattctagcagccgtaggggtgacagtgatttgccactgttcaaatcgaagcacatgacc
gttgaagaaatagagagcattttgagaacacagcatgctgacacccatggcaacgatgac
ccatacgtgaacgattattatcaccaagcctgtcttgcaaaaaatgcggctgaaacaaag
tcaaaatgtcgttttcacccttcccaccaaaaagaacaatcttcccgatcccataatagt
actgattcacagcctcatctccatgttgatgcacttggaagggtttgcttttcgtcgatt
catagacctcgccctgttcttgacgttgaccctccactctctgcttgtggagatggtagt
gctgagcagaaattgactgtgaggcctttggaacaggaaccaatgtttgctgcgagggtt
acaattgaggatggtttatgccttcttttgtttgtagatgacattgaccggctcttaaag
ttcacccaaccccaagatggggggatccagcttaggcggaagcgccatatgctgttagaa
ggattagctgcctctcttcagctggttgacccatttgggaaaagcagtacctctgttgga
ttttccgacaaggatgatattgtgttcctgcaattagtttctcttcccaagggccgtaaa
cttatatcaaggtttcttcagcttcttttacctggcagtgagcttgtacgaatagtttgc
atggccatcttccgccatttaagatttctttatggggttctccccccggatccggaagct
gctgattccattattgatcttgccaaaactgtctctgtgtgtgttggtggtatggatctt
aattcactcagtgcttgtcttgctgctgttgtttgttcctctgaacagccgcctcttcgt
ccagtaaggagccctgcaggagatggtgcctcagtcatcttgaaatctgttttagaaaga
gcagcacacttattaaaagatcctcagtctgcaatgaactttagcataccaaattccgcc
ctttggagggcttcatttgatgcgtttttcggtctcctgactaagtactgtatcagcaag
tatgatagtatagtacgatcgttaaccactctaagcctgccaaattcggaggttgctaga
gttgtaagcagggagatgcccatggaactctttcgagccagcctcccacacactgatgag
aatcggaagaatatattaatgaaattcgcacagcgagccatacctgtgagtagatccagc
aatcatggtggaagtggtggacaaaaaaatcctgaatcagtgagaggttag
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