Primulina tabacum: 142537023
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Entry
142537023 CDS
T11246
Name
(RefSeq) nuclear pore complex protein NUP58-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142537023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142537023
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142537023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
DUF5917
Motif
Other DBs
NCBI-GeneID:
142537023
NCBI-ProteinID:
XP_075498656
LinkDB
All DBs
Position
2:complement(53821217..53825067)
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AA seq
488 aa
AA seq
DB search
MAFSFTPQQQQQQSPFQSPFNQPNPFQQTTPSQPQQQPQSPFQFQPQQSQTHPQLQQPHP
QQPHTQQQLYLLTNDKAPATYSTKWAELHPDSQKVLHQIEERILGYRDESQRLDQCSRLY
DSSISNNGFENDASSIMQQELGGISIAIDRQKAILQKLMTVVKDMLRNTEGAVRSFMILQ
PRFLHQNKTAAASASAPSQTLGAMTTQTSSGHAAANNLLPVLDFYSGVPKKPSPFLHQTV
DRFEKYISECRQWIEELEQLLFLDEKNSCNPSSSLLQSLPKVLANVHDYFVHVAAKVESI
HQYIESMKTAYLADQRRQGDGNNPFLEADRRETAKQEAASRRIHPTLHLPAVSNPTAQAT
GPLNNSAAPVSSMTTSAPAAVYASSGSASSLFSTPSIATSSPSLFPTPTSSAPVLSLLGT
TVSPQSSPFSSLSASSSAFPISTPLFSSTPASGVSTFSTPFATGAATGSGASFGTLSKAR
AKSRTGRR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcattctcgttcactccacagcaacagcagcagcaatcgcctttccagtctccgttc
aaccaacccaatcctttccaacagactaccccatcgcaaccccaacagcagcctcaatcc
ccgttccagtttcaaccccaacagtcacaaacgcacccgcagctccagcaaccgcaccct
caacaacctcatacacagcagcagctttatcttctaactaatgataaagctcccgcaact
tacagtaccaaatgggcggagctccatcccgactctcaaaaagttctccatcaaatcgag
gaaagaattttgggatacagagatgagagtcagcgactggatcagtgtagccggctctat
gattcatccatttccaacaacgggtttgagaacgacgccagctctatcatgcagcaggaa
cttggaggaattagcatagctatagatagacagaaggcaattctacaaaagctaatgact
gttgtcaaagatatgctacgaaacacagaaggggctgtccgttcctttatgattttacag
ccaagatttcttcaccaaaataaaacggctgctgcaagtgcttctgcaccatcccaaact
ttaggagcaatgaccacacaaacttcaagtggtcatgctgcggcaaataatttactgcca
gtacttgatttctacagtggtgtaccaaagaagccatctcccttcttgcaccaaactgtt
gacagattcgagaagtatatatcggagtgtcgtcagtggatcgaagagttggagcagttg
ctttttttagatgaaaagaactcttgcaatccaagttcttcgctgttacaatccctgcct
aaagtcttggcaaatgtacatgactattttgttcatgttgcagcaaaggttgaaagtatt
catcagtatattgaatccatgaaaaccgcatatcttgctgatcagcgacgtcaaggggat
ggcaacaatccatttctcgaggctgatcgacgggaaacagctaaacaggaggccgcctct
cgaaggatacacccaactcttcacttacctgcagtttcaaatccaactgctcaagctact
ggaccattaaacaactcagctgcacctgtctcatcaatgacaaccagtgctcctgctgct
gtatatgcttcgagtggaagtgcatcctcactcttttctactccatcaattgccacatca
tctccttctctattccccactcccacatcttctgctccagttttgtctttgttagggacc
acagtttccccccagtcatcaccatttagttccttatctgcgtcatcctcagcatttccc
atttccactcccttgtttagttcaaccccagcttctggagtctcaacgttttcaacacct
tttgctactggtgccgcaactggatcaggagccagctttgggactttatctaaggcgaga
gcaaaaagccgcactgggcgtcgctga
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