Primulina tabacum: 142538099
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Entry
142538099 CDS
T11246
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ptab Primulina tabacum
Pathway
ptab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142538099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptab04040
]
142538099
Ion channels [BR:
ptab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142538099
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Paralog
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
IQ
DUF3382
Motif
Other DBs
NCBI-GeneID:
142538099
NCBI-ProteinID:
XP_075499655
LinkDB
All DBs
Position
2:54140804..54144312
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AA seq
640 aa
AA seq
DB search
MEDSQISNSGECYACTRDSIPVFHSASWYKADQPEWEASAGSSLLPIKNRLDRKNLNTHL
ASNHPFVRSLDPRSKGVRRWNRAILLARSMSLAVDPLFFYVLSIGRGGSPCLYTDRVLVA
IATVLRVCLDALHLCHVWLQFRLAFVPKESLVIGCGKLVWDTRAIAAHYLRSLDGFWFDV
FVILPVPQAVYWLVMPRLITEERAQHITTILLSSFLFQFLPKIYHTLSLIRRMQKVTGYI
FGTIWWGFGLNLIAYFIASHVVGGCWYILAIQRVVSCLGQRRNPEVVGRKSFCLDVNGSF
GYGIYTWALPVVSSNSVSVKILYPICWGMMTLSTFGNNLEPTSDWKEVMFSISLVLGGLL
LFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPLKLRQRVRRYERQRWTILGG
NDGLEFISDLPDGLRRDINRFLCLDLIKKVPLFHTLDDLILDNICDRAKPLVFSKDEKII
REGDPVQRIVFIVHGRVKRSQNLSRGILATNILESGTFFGDELLSWCLRRPFMERLPHSS
AAFTCLESTEAFALEANHLRYITDHFRYKFVNERVRRTARYYSSNWRTWGAVNIQLAWRR
YMQRSSHCSVGYGSGTADGDRRLRQYAIFFMSIRPRDHLE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagccaaatctccaactccggtgaatgttacgcatgcactcgagacagcatc
cccgttttccattccgcaagctggtacaaagccgaccagccggagtgggaggcgtccgcg
ggttcttccctcctcccgataaaaaatcggctggacagaaaaaacctcaacacccacctc
gcctcgaaccacccattcgtcagaagtttggacccacggagcaagggcgtgcgacgttgg
aacagggcgatcttgttggcgcgtagcatgtcgttagctgtggacccgctcttcttttat
gttttgtccattggccgcggtgggtcgccgtgcttgtacactgaccgtgtgttggtcgct
attgccaccgtgctgcgtgtttgcctcgatgccttgcatttatgccatgtgtggctgcag
ttccggctggcttttgtgccgaaagaatccctggttattggatgcgggaaactcgtttgg
gacacacgtgcaattgctgctcattacttgcgatcactcgatggattctggtttgatgtt
tttgtcattctaccagttcctcaggctgtttattggttagtgatgccaagattgatcaca
gaggaaagagcacagcatataacaacgattctcttgtcgagtttcttgttccaattccta
cctaagatatatcacaccttgtccttgataagaagaatgcagaaggtaacaggctacatc
ttcggcacaatttggtgggggttcggccttaatctcatagcatacttcatcgcctctcac
gttgtgggtggatgttggtacattcttgcgatacaacgtgtagtgtcgtgcctcgggcaa
cgacgcaacccagaagttgtgggtagaaaatcattctgcttggatgtcaatggatcgttt
ggatacggaatatacacatgggcacttcctgttgtatctagcaactcggtgtctgtcaag
attctttatcccatttgttggggaatgatgacacttagtacttttggcaacaacttggag
ccaacaagtgactggaaggaagtaatgttcagtataagccttgtccttggtggtttgctg
ttattcactctgttgattggaaatattcaggtatttttgcacgctgtcatggccaagaag
agaaaaatgcagctaaggtgccgtgacatggaatggtggatgagacggaggcaattgcca
ttgaaactgaggcaaagagtcagacgttatgaacgacaaagatggactatattgggtggt
aatgatggattagaatttatttctgatctaccagatggactcagacgcgacattaatcga
tttctttgccttgatctgataaaaaaggtaccactgttccacaccttggatgatctgata
ctggacaatatatgtgaccgtgccaagcctctcgtcttctccaaagacgaaaagataata
cgagagggtgaccctgtgcaaagaatcgttttcattgtgcatggtcgtgtaaagagaagc
caaaatctaagtagagggattctggccaccaacatcctcgagtcaggtacattctttggg
gacgagcttctctcttggtgcctgcgtcgcccttttatggaaaggcttccgcattcttcc
gccgcatttacatgcctcgaatcaacggaggcatttgccttagaagccaaccatcttcgg
tacatcacggatcattttcgctacaaatttgtgaacgagagggtgagacgcacagcaaga
tactattcgtcgaattggaggacatggggcgctgttaatatccaattagcttggcgacgt
tatatgcagaggagttcacattgttcagttggctatggctccgggactgcggatggtgat
cgccgcctgaggcaatacgccatattctttatgtcgattcgaccccgtgatcatcttgaa
taa
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