Primulina tabacum: 142538349
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Entry
142538349 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC142538349
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
142538349
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
142538349
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
142538349
NCBI-ProteinID:
XP_075499802
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All DBs
Position
3:complement(7331617..7339327)
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AA seq
939 aa
AA seq
DB search
MGTWRIERRLNFTFWWMRVVTQLFFVLGDIRGQARQETYGVRLLQQDQQVLLYNGIISIT
LTAPAGVLTSVTYNGSHNLLETRNSDDNRGYWDVIWNIPGDHGRMDKFLGTSYNVILQDE
NQTEISFTRTWAVGSEKVPLNIDKRFVMFRDSPGFYTYAVLEKLEGWPAFDIQEGRFLLK
LQENMFHYMAMSDVRQRVMPMPIDRVTGTVLDYPEAVLLTNPTNPELKGEVDDKYLYSCD
NKDNKVHGWIRDDLGVGMWMITPSIEFKTGGPLKQDLTSHVGPTMLSMFISTHYAGEDLA
LKFKAEEYWKKVFGPFLVYFNSDALAKVNASILWEDAKKKASEEVGSWPYGSPLSKDFLK
SDQRGEISGQLHVYDRYVNKDTPGAGAGAYVGLATPGEPGSWQKESKGYQFWTQADTDGN
FSIKNVVPGTYSLFAWVPGIIGDYKYTPNITIFPGSDIKLENVVFEPPRKGPTLWEIGIP
DRTASEFFIPDPTNYKKHLYKNDTEKQVLSAYRNLIRCXICLTLFTFHNYRFRQYGLWYC
YKDLYPDADLNFTVGESNYEKDWFFAHVTRKLGYRQYEATTWRILFDLENVKNGANYTLQ
LALASANGAELQVRFNDPELPPDFTTNLIGQDNAVARHSIHGLYHLYSIDIAGCRLVDGK
NTIFLTQAMNMGPFKEVMYDYIRFEGPAEAPYTGEELSRSWRRFELKKVMFITFEVSKIE
FESLDTVTRRWVFNGALTTGSPLLCRREDSVIYLLNDMADFDYHQYWDPSLQSWSHQYTP
EISQSDFTDQPFEHQEGEGYSLEIIIGRLNDMVNKRVALNGKTVEPQSEEVLEEISHEDE
APMKLRDEQAPETIDLSSSIILSYIHLGDPCLSPLPISTDFVLQEPTMILSSQAYYLKSR
FVEDTSLYCIYQAKLEGTWNQDPFMVSYDTYFGRQPLFE
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtggcggatcgagaggcggctcaatttcactttttggtggatgagagttgta
acacaactattctttgtacttggtgacattcgaggacaagcaaggcaggagacttatgga
gtgcgattacttcaacaagatcaacaagtgctattgtataatggcattattagcatcacg
ttgacagcacccgctggagtgctgaccagcgtcacgtataatgggagtcataatttgctt
gaaactcgaaattcagacgataatagagggtattgggatgttatctggaacataccaggc
gaccatggtcggatggacaagtttcttgggacaagctacaacgtaatactacaagatgaa
aatcaaaccgaaatttcgttcaccaggacatgggcagttggtagtgaaaaagtcccttta
aatatcgacaaaagatttgtaatgttccgtgactcccctggattctatacgtatgctgtg
cttgagaagctcgaaggatggccagctttcgacatccaagaagggcgatttttgttgaag
cttcaagaaaacatgttccactacatggccatgtcggatgtaaggcaaagggttatgcca
atgccaatagatcgcgttacaggaacggtactcgattatcccgaagctgttctactcact
aatccaaccaatccggagctcaaaggagaggtggacgataaatatctgtactcatgtgat
aacaaagataacaaggttcatggatggataagagatgatttaggtgtgggaatgtggatg
ataacgcccagcatcgagttcaaaactggtggccctttaaaacaagatctcacctctcat
gttggccctactatgctctccatgtttattagcacgcactatgcgggggaagatctagct
ctcaaattcaaggctgaagagtactggaaaaaggtgttcggtccttttctggtttatttc
aactctgatgctttagccaaggtgaatgcttcgatactttgggaggatgccaaaaaaaag
gcgtcggaggaggttggtagttggccatacggttcccctctttcaaaagatttccttaaa
tccgatcaaaggggtgagataagcggccaattacatgtttatgacaggtacgtaaataaa
gatacacccggagctggagctggagcttatgttggattagcaaccccaggagaaccgggg
tcgtggcaaaaagaaagcaagggctatcaattttggacacaagcagacactgatggaaat
ttctcgattaagaatgtggtgcctggaacatattccctctttgcatgggttccaggaatt
atcggagactacaaatatactcctaacataaccatttttccaggatctgatatcaagcta
gaaaatgtggtttttgagccaccaaggaaaggtcctacactatgggagattggaatcccg
gatcgtacggcttctgaatttttcatcccagatccaactaactataagaaacatttgtac
aaaaatgacacggaaaagcaagtcctctccgcatacagaaatttaatacgttgttaaata
tgtttaacattattcacatttcacaattacaggtttagacaatatggattatggtattgc
tacaaggatttataccccgacgctgatttaaatttcaccgttggagaaagtaactacgag
aaagattggtttttcgctcacgttacaaggaaactgggatatcgtcaatacgaagcaaca
acatggagaattttgttcgaccttgaaaatgtcaagaatggagcaaactacactctgcaa
ttggcccttgcatcggccaacggtgcagaattacaagtacgtttcaatgatccagaattg
cctccagattttacaacaaacttgattggccaagacaatgcagttgcgagacatagtatt
catggattataccatctctatagtatcgacatcgcaggctgtcgactcgttgatggcaag
aacaccatattcttaacacaggcaatgaacatgggtccgttcaaagaagtcatgtacgat
tatatccgtttcgaaggacctgcggaggccccatatacaggagaggaactttcgcggtct
tggagaagatttgagttaaaaaaagtgatgtttatcacatttgaagtttccaagatagag
tttgaaagtttggatacagttacacgaagatgggtatttaatggagcactaacaactggt
agtccactactttgtcgacgtgaagacagtgtgatatatttgctaaatgatatggccgat
tttgactaccatcagtattgggatccttcgctgcagagttggagccaccaatacactcca
gaaattagccaatctgattttacagaccaacctttcgagcatcaagaaggtgagggatat
agtcttgaaataatcataggtcgattgaatgacatggtaaacaagcgcgtggcattgaat
gggaaaactgttgagcctcagtctgaagaagttttggaagaaatatcacacgaagatgag
gcaccaatgaagttgagagatgaacaagctcctgagactatcgatttgagctcgtcgata
atattatcatacatacatctaggagatccttgcctttctccattgccgatttcaacagat
tttgttcttcaagagccaacgatgatactctcatctcaggcctactatttaaagtcacgt
tttgttgaggatacgagcttatattgtatatatcaagccaaacttgagggcacatggaac
caagacccatttatggtgtcatatgacacttactttgggcgtcagccgctctttgaatga
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