Primulina tabacum: 142538428
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Entry
142538428 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142538428
KO
K08518
syntaxin-binding protein 5
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142538428
Membrane trafficking [BR:
ptab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142538428
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
142538428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WDR55
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_IFT140_1st
Utp8_b_propeller
Beta-prop_CAF1B_HIR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
142538428
NCBI-ProteinID:
XP_075499863
LinkDB
All DBs
Position
3:12130451..12141789
Genome browser
AA seq
1079 aa
AA seq
DB search
MEFSAQAPRVFVHYGIPSTASILAFDPIQRLLAIGTLDGRIKVIGGDNIEGLLISPKALP
FKNLEFLQNQGFLVSVSNENEIQVWDLRKRCISSNIQWESNITAFSVIPSTHFIYLGDEY
GFLSVLKHDAEGGKIIQLSYHIPPNLVAEGSGISLPDNQSVVGVLSQPRSYGNRVLVAYE
NGLIILWDVTEDRAVHVRYHKDLQLKEGPVFNFSNNESHTCQSDSPENDHGEKDISSLCW
VSPDGSALAVGYVDGDVLLWNLSVPDNVKSQRSQNMFNDVVKIQLSSGGRRLPVIVLHWS
SNKAQNSRGGLLFAYGGEDIGSEEVLTILNLEWSAGLVQLKCVERVDLTLHGSFADVIIT
TKAHEPDNFSSTSLFILTNPGQLHFYDFASLSIFKPGTGHNHSVHAFQYHSIIPTVEPCM
TVGKLYLMRRDRGFFCELSEFSPAKLQEDDVLTGRGSRWPLTGGVPCHLSAAANKLQKMY
IGGYQDGSVRIWDATSPVLSLVSVLRLKIEGIQVSGASSAVSALGFSSITLTLAVGNESG
VVLIYILQGNSNQTILTLITETSRDDQHLPHAESNQCSAIFSLLNSPVRVLQFVNSGVRL
LVGYESGQVAILDTSLLSVLTITDYLSSSRSPIISVAVKTFPDTHENNINNSENEIVSES
TTELAFVLTRDAHTVLSRLCQRQYGELYVYVLWGLLHTEGKRPLSERSKNVFVMSTEHVD
AENQPLQSSLENLSGLSSVEGHMQPTCLRDETLESYILLCCNDAVYTYSLKSFFQGDCNF
VRLLNLEKPCSWTTIFKKNAEEYGLIFVYQTGEIEIRSFPDLELVGDTSLMSILRWNFKN
NMEKTMCASDEGQITLVNGCEFAFISLLAFENEFSLENLPCLHDEALAAAADADVNFTLN
QKKAQGAMPGFISNMIKGLKGGEGEQNMSYMESREIMIARLDGMFSRFPFSDPFGSFDEE
DLELGIDDIDIDEPVVVSTSQKSSNDIKEKGRERDRLFEGGSSDNHPKVRTREEIIAKYR
NTGDAAVSASQAKDKLLERGEKLDKLGKRTAELQSGAESFASMANELAKTMEKRKWWNI
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaattctcggcccaggcaccccgtgtttttgttcattatggaatcccatctaccgca
tcaattcttgcctttgaccccatccagcgcctcttggcaatagggacactggatggcagg
attaaagtgataggtggtgacaacattgaaggccttctcatatctccaaaagccttgccc
tttaaaaacttagagtttctgcaaaaccaaggttttttagtgagcgtctccaatgaaaat
gaaattcaggtttgggatctaagaaagaggtgtatatcttctaatattcagtgggagtcc
aatataacagcattttctgttattccatctacccatttcatttatctaggagatgaatac
ggattcttatctgtgttgaagcatgatgctgaaggagggaaaattattcaattgtcgtat
cacattcctcctaatcttgtagctgaaggatctgggatctcattgcctgataatcagtcc
gttgttggtgtgctctcccaacctcgttcatatggaaacagggttttggttgcttatgag
aatgggttgattattctgtgggatgttactgaagatagagctgtacatgttagataccac
aaggatctccagctaaaagagggaccagtttttaatttttccaataatgagagccacacg
tgccaaagtgattcaccagaaaatgaccatggagagaaggacataagttctctctgttgg
gtgtctcctgatgggtcagcattagctgttggttatgtggatggggatgtcttactttgg
aacctgtcagtacctgacaatgttaaaagtcagaggagtcaaaacatgttcaacgatgtt
gttaagatacaattatcatctggaggtagaagacttcccgtcattgtcttgcattggtct
tcgaacaaagcacaaaatagtcgtggaggcctactttttgcatatggtggtgaagacatt
ggatctgaagaagttttgactatcctcaatcttgaatggtctgctgggttagtacaactg
aagtgtgtggagcgtgttgaccttacgctccatggatcatttgctgatgtaattataaca
acaaaggctcatgagcctgacaactttagctcaacttcattatttatattgaccaatcca
ggacaactgcatttctacgattttgcttctttgtctatcttcaagcctgggacaggacat
aatcattcagtccatgcatttcagtatcattcaataatacccactgtggaaccatgtatg
accgtgggaaagctttatttgatgcgtagagataggggtttcttctgcgaactttcagag
ttttcacctgccaagctacaagaggatgatgtgttgaccgggaggggttcgcggtggcct
ctgactggtggtgttccttgtcatctgtctgctgctgcaaataaacttcagaagatgtat
ataggaggatatcaagatggatctgttcgaatatgggatgccacttctccagttctgtca
cttgtttctgttttacgattgaagatagaaggaattcaagtttctggtgcaagttcagca
gtatcagcattgggcttttcttctatcaccttgaccttagctgttggcaacgaaagcgga
gtggttttgatttatatacttcaaggcaattccaaccagacaatcttgaccctgataact
gaaaccagtcgtgatgaccaacatttgccacatgcagagagcaaccaatgttcggctata
ttttccttactgaattctcctgtacgtgtcttacagtttgtaaattctggagtcagactt
cttgttggatatgaaagtgggcaggttgctatacttgatactagtttattgtcagtgttg
actataacagattatttgtctagctcaaggtcacccatcatttcagtggcggtgaaaact
tttccagatactcatgaaaacaatataaataattctgaaaatgaaattgttagtgaatct
accacagagcttgcttttgtattaactagagatgcgcacacagtcttaagtagattgtgc
cagaggcaatatggtgaactctatgtttacgtcctgtggggccttttgcacacagaagga
aaacgtcctctctctgaaaggtcaaaaaacgtttttgtgatgtctactgagcatgttgat
gctgaaaatcaacctctgcaatccagtcttgaaaatctgagtggtttgtccagcgtggaa
ggccacatgcaacccacatgtttaagggacgagacattggaatcctatattttattgtgt
tgcaatgatgctgtgtacacatactccttaaagtctttctttcagggtgattgtaacttt
gtacgtttactgaatcttgagaaaccatgttcctggactacaatcttcaagaaaaatgcg
gaagagtatggattgatctttgtttatcaaactggagaaattgaaatacggtcttttcca
gatcttgaactggtgggagatacctcattgatgtcaattcttaggtggaacttcaaaaat
aatatggagaagacaatgtgtgcttccgacgaagggcagattaccttggtcaatgggtgt
gaatttgcttttatatctcttctggccttcgaaaatgaatttagcctcgaaaatctacct
tgtctacatgatgaagcccttgctgccgctgcagatgctgatgttaatttcactctaaac
caaaagaaggcacagggtgcaatgcccggatttattagtaatatgatcaagggtttaaaa
gggggtgaaggagagcagaatatgagttacatggaatctcgtgaaatcatgattgcgcgt
ttggatggaatgttttcaaggttcccattctctgacccctttggttcttttgatgaagaa
gatttggaacttggcatagatgatattgacatagatgagccagtcgttgtatcaacttca
cagaagagtagtaatgacataaaagagaagggtagagagagagacagattatttgaaggt
ggttcttctgacaatcatccaaaggttcgaacacgcgaggaaattattgcaaaatatagg
aacacgggagatgctgcagtttcggcttctcaagcaaaggataaacttctagaacggggg
gagaaacttgataaacttggcaaaaggacagccgagctacaaagtggtgctgaaagcttt
gcgtcaatggcaaatgagctcgctaagacgatggaaaaacgcaagtggtggaacatatga
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