KEGG   Primulina tabacum: 142539359
Entry
142539359         CDS       T11246                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
ptab  Primulina tabacum
Pathway
ptab03018  RNA degradation
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142539359
  09123 Folding, sorting and degradation
   03018 RNA degradation
    142539359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142539359
   03041 Spliceosome [BR:ptab03041]
    142539359
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     142539359
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     142539359
Spliceosome [BR:ptab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    142539359
 Complex C
  U2 snRNP components
    142539359
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-GeneID: 142539359
NCBI-ProteinID: XP_075500883
LinkDB
Position
3:complement(3303125..3304564)
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAMRGTLHSVDQYLNIKLENSRVVDQDKYQHMLSVSNC
FIRGSVVRYVQLPSDGVDVELLHDATRREARGS
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcctacttcaaggatctggttgggagagaagtgacggtggaactgaag
aacgacttagcaatgagaggaacccttcattctgtggatcagtatttgaatattaagctg
gaaaacagcagggttgttgatcaagacaagtaccaacatatgctctctgtaagtaattgc
ttcatcagagggtcggtggttaggtacgtgcaattgccctctgatggagttgatgttgaa
ttgttacatgatgccacaagaagagaagctcgaggcagctag

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