Primulina tabacum: 142539655
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Entry
142539655 CDS
T11246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142539655
03036 Chromosome and associated proteins [BR:
ptab03036
]
142539655
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142539655
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
Pre-60S particles
Helicases
142539655
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
142539655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
Motif
Other DBs
NCBI-GeneID:
142539655
NCBI-ProteinID:
XP_075501369
LinkDB
All DBs
Position
1:8562768..8568595
Genome browser
AA seq
703 aa
AA seq
DB search
MPSVVAAESPSSEKKLKMKNVEACAVEEDYVEKNGKKEKKSSKKTKLTSEPDTDYLNSNT
HLKKSKETKRKALKIDDDDEEEERSETSTETGEPMNDLGKKKKRMKLNEEEEEDENPNAV
SNFRISKPLRDALKVKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL
TNGPAKASRKTGYGRTPSVLVLLPTRELATQVFSDFEAYGGALGLNSCCLYGGSPYQPQH
IQLKRGVDIVVGTPGRIKDHIERGNIDLRALKFRVLDEADEMLRMGFVEDVELILGKVQD
ASKVQTLLFSATLPAWVKQIAAKFLKPDKKTADLVGNEKMKASISVRHIVLPCSSSARSQ
LIPDIIRCYSSGGRTIIFTETKDSASTLAGLLPGARALHGDIQQATREVTLSGFRSGKFS
TLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRKSNFS
RIERESGVKFEHISAPQPADIAKAAGLEAAEKITEISDSVIPVFKAVAEELLNSCDLSPA
ELLAKALAKAAGYTEIKSRSLLTSMENFVTIFLESGRPIHSPSYVYGILRRFLPEEKVES
IKGLSLTADGTGAVFDVAAEDLDTFIAGQESAAGVNLEVVKSLPSLQQREPVRGGRFGGG
GRGGFSDRQNGRFSFGRGGKGGFADWRGRGGGGRGRGNAGHKW
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggtggttgcggcggagtctccatcgtccgagaagaagctgaagatgaaaaat
gttgaggcttgtgccgttgaggaggattatgtggagaaaaatggcaagaaagagaaaaag
tcaagcaaaaagactaaactaacctctgagcctgatacagactatttgaattccaatacc
catttgaaaaagagcaaagagactaagcgaaaggcattgaaaattgacgatgatgatgag
gaggaggagaggagcgaaactagtacggagactggcgagccgatgaatgatctaggaaag
aagaaaaagaggatgaaattgaacgaggaggaggaggaggatgagaaccccaatgcggtg
tctaatttccggatatcgaagccgttgagggacgctttgaaggtgaaagggatcgaatcg
ctgtttcctattcaggcgatgacgttcgatactgttcttgatggttcggatttggttgga
agggcgcgcactggtcaggggaaaacattggcattcgtgttacccatattggaatcattg
acaaatggacccgcaaaagcatcccgaaagactggatatggaagaacacctagtgttctt
gtgcttttacccactagagaattggccacacaggtgttttctgactttgaagcctatggt
ggggcattagggttgaattcatgttgcctgtatgggggttctccctaccagccacaacat
attcaattgaaaagaggtgttgatattgttgttggtactcctggtcgtatcaaggatcac
atagagaggggaaatattgatcttagggcactaaagttccgagtacttgatgaggctgat
gaaatgttgaggatgggttttgttgaagatgttgaacttattctaggcaaggtacaagat
gcaagtaaagtccaaactctcctctttagtgccactctaccagcctgggtgaagcaaatt
gcagctaaatttttaaaacctgataaaaagaccgctgaccttgttggaaatgagaaaatg
aaggctagcatcagtgtgaggcatattgttcttccttgctctagttctgccagatcccag
cttattcctgatatcattcgctgctacagcagtggaggccgcactattattttcactgag
actaaggactctgcttctacactagctggattactgcctggagcacgagctttgcatggg
gatatacagcaggcaacacgggaagttaccctttctggatttcggtctggaaaattttca
acacttgtagctaccaatgtcgccgcacgtggattagatattgatgatgttcagttaata
attcagtgtgagcctcctcgtgatgtagaggcgtacattcatcgatctggaagaacaggc
agagcaggcaaaagtggtgttgctgtgatgctttatgatccaaggaaatcgaacttttca
aggattgaaagagaatctggtgtgaaatttgaacacatatctgctccacaaccagccgat
atagctaaagctgctggtttggaagctgcagaaaagatcaccgagatctctgatagtgtt
attccggtgttcaaggctgtggctgaagagctgctgaactcgtgtgatttatcaccagca
gaattactcgcaaaagctctggccaaggctgctggctataccgagatcaagagcagatca
cttctcacttctatggagaactttgtgacaattttcctcgaaagtggaaggcctattcac
tcaccatcctatgtttatgggattctacgaagatttttacctgaagaaaaagttgagtca
atcaagggactttctttaacagctgatgggacgggggcagtttttgatgtggctgccgaa
gatctggacacattcattgctggccaggaaagtgctgctggggtgaacttggaggtggta
aaatcattacctagtttacaacaaagagagccggttagaggtggaagatttggtggtggt
ggacgcggtggtttctcagacaggcaaaacggtagattttcttttggaagaggagggaaa
ggagggtttgccgattggcgaggccgtggtggagggggtagaggtcgtggcaatgccggc
cacaaatggtga
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