Primulina tabacum: 142539780
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Entry
142539780 CDS
T11246
Name
(RefSeq) ABC transporter B family member 28-like isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ptab Primulina tabacum
Pathway
ptab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
142539780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptab02000
]
142539780
Transporters [BR:
ptab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
142539780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_5
AAA_30
AAA_29
RsgA_GTPase
AAA_16
Rad17
AAA_15
AAA_25
AAA_33
nSTAND1
Motif
Other DBs
NCBI-GeneID:
142539780
NCBI-ProteinID:
XP_075501598
LinkDB
All DBs
Position
1:complement(8710830..8716169)
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AA seq
718 aa
AA seq
DB search
MAAAPLAPPLNYSTPKHFLTHKPPRINLNLTENLKPRRISSPPTSISWSKSGQRSRKLPS
RITGHAYVSGAFDAIVPENEPRIEESEVVELRPIYVISWGILLNLVLRHKWRVLASVITL
FGGSICMLAMPVLSGRFFEVLIGARQESIWKVLSRVGILYIFEPICTVIFVINMSAIWEK
VLTSLRAQIFQRMLIQKMDFFDRYKVGELTALLTSDLGSLNDIVSENISRDRGFRALSEL
LGTMCILFSLSPQLAPVLGLLMVSVSLLVAVYKRTTVSVFKAHGSVQASIADCVNETFAA
IRTVRSFGGEKHQMSIFGRQVLDYESSGITLGLFKSVNESLTRVAVYVSLMALYCLGGSK
VKSGELAVGTMVSFIGYTFTLTFAVQGVVNTYGDLRGAFAATERINSILSGAQIDEALAY
ALEKDLKRRKVHDSNLETLLLNGSSGMTQNRSIGYMSSLKSASNVRSLAFSGDICLEELH
FSYPLRPDVEILKGLNLKLKCGTVTALVGPSGAGKSTVVQLLSRFYEPTSGRITVAGEDL
RSFDKSEWARIVSIVNQEPILFSVSVGENIAYGLPDEYVSKEDVIKAAKAANVHDFIISL
PQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSERLVQDALNVL
MKGRTTLVIAHRLSTVQSANQIAVCSDGKISELGTHLELLEKNGQYASLVGTQRLAFE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctcccttagctcctcccctcaactactccaccccaaagcacttcctcacc
cataaaccacctaggatcaacctcaatctcactgagaatctcaaacctaggagaatttcc
tcaccacccacttcgatttcttggtcaaaatctggtcagaggtcaagaaagctgccgtca
agaatcaccggccacgcctatgtttcgggcgcatttgacgcaatcgtgccagaaaatgaa
ccaagaatcgaggaatccgaggttgtggagctccgtcccatttatgtgataagttggggg
attctgttgaatcttgttctgcggcataaatggagagtcttggcttctgttattactctt
tttggtggctctatttgcatgcttgctatgcctgttttgtcagggagattcttcgaagta
ctgataggggcaagacaggaatctatctggaaagtgctgagtagagtaggaatcctctac
atatttgagccgatttgtacggtcatatttgtgataaacatgagtgcaatatgggagaag
gttttgaccagcttaagagctcaaatatttcaaaggatgttgatccagaagatggacttt
ttcgacaggtacaaggtcggagaactaactgctctgttgacatctgatttgggttctctc
aatgacattgttagtgaaaatatatcaagagatcgaggtttcagggcactttccgagctc
cttgggactatgtgcatacttttctctctctctcctcagcttgctccagttttgggccta
ctcatggtctcagtttctttattagttgctgtgtataagcgaacgactgtaagtgtattt
aaagctcatggatcagtccaagcctctatagctgactgtgttaatgagacatttgctgcc
atacgtacagtaagatcctttgggggagaaaaacatcaaatgtcaatttttggacggcag
gttcttgattacgagagtagtggtataactctagggttatttaagtctgtcaacgaatct
ctaaccagggttgctgtttatgtctctttaatggccttgtattgtctgggaggaagcaaa
gtaaaatctggtgaactagctgtgggaaccatggtttcttttattggatacacttttacg
ttaacatttgctgttcaaggggtggtaaacacctatggagatcttcgtggagcttttgct
gctacagaaagaataaactctattttatctggtgcccaaattgatgaagctctagcttat
gctttagaaaaagacttgaagagaaggaaagtgcatgactcgaatcttgaaactcttttg
ctcaatggttctagtgggatgacacaaaacaggagcattgggtatatgtcttccttaaaa
tctgctagcaatgtgcgtagtctagcattctccggtgatatctgccttgaagaacttcat
ttctcttaccctctaaggccggacgtggaaatacttaaagggctcaatcttaagttaaaa
tgtggcacagtgactgctttagtcggccccagtggtgcaggcaaaagtacagtcgttcag
ctcttatctcgcttttatgagccaactagtggccgcataactgttgctggggaggatttg
cgatcgtttgataaaagtgaatgggctcgtatcgtttccatagtgaatcaagaacctatt
ctattctctgtgtctgttggagaaaacatagcttatggtctcccagacgaatatgtttcc
aaggaggatgtgataaaggctgccaaggcagcaaacgttcacgattttataatctcattg
ccacagggttatgacacactagttggggagcgcgggggtttgttaagtggaggacaaaga
cagaggattgcgattgcaagggcccttctgaaaaatgctccaatcttgatccttgatgag
gcaacgagtgccttagacactgttagtgaacgcctcgttcaggatgccttgaatgtccta
atgaagggacgaacaacattggtaatcgcccacagattgagcacggttcagagtgcaaat
caaattgctgtgtgttcagatgggaagatttctgaactagggacacaccttgagttgtta
gaaaagaatggtcagtatgcttctttggttggcactcaaagacttgcatttgagtga
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