Primulina tabacum: 142539861
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Entry
142539861 CDS
T11246
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142539861
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142539861
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR_long
PPR
PPR_1
Motif
Other DBs
NCBI-GeneID:
142539861
NCBI-ProteinID:
XP_075501717
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All DBs
Position
3:8049636..8052749
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AA seq
813 aa
AA seq
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MLPSNHFCNFHIPPTQIQRPYSAKLYLLNCRPSFHRHHLYCAPLPAKSHQNSTYPLVSSP
DAISTLASDCSEEAKESEIDSLNHLEAESFNFRGSSGSADLNKRFDSPVVEVKELEELPE
QWRRSKLAWLCKELPAHRSSTFTRVLNAQRKWIRQDDCTYIAVHCMRIRENEASFRVYKW
MMQQQHWFRFDFSLATKLANYMGKEGKYLKCQEIFDDIVNQGLVPNESTFHVLIVAYLSS
SASNALDQACKIYNCMIHLGGYKPRLSLHNSLFRALLTKMGGSCKPYLKQAEFIFHNLVT
CGLEIHNDIYSGLIWIHSYQDEIDKERIESLRMEMKLNGIEESEEMLVSVLRACSKAGDI
VEAERTWTEIISLNYKPSNQAYVYLMEVYSKIGKPMKSLEIFRKMRKGHSSSVVAYYKII
EVLCKAHEMELAEALMLEFIDSGMKPLARSFIDLMVMYSDLNLHDKVESSFLMCLEKCRL
NQAVYSMYLDSLVKVGNLDRAEEILNQMHSDEAIGVNARSCNTILRGYLTCCNYTKAKNV
YNLIRLKKFHIETSLMEKIEKLQSLGHQDMEKSVKPKLSKEQRETLVGLLLGGLKIELDE
MEKNQNQAIQFVFRENFRIHYFLKRHIYSQFREWLSHTEKLVDEDGTGENDDIPCCFTTI
SHTCFRFYADQFWPQGRPVIPKLIHRWVTPRVLAYWYMYSGYRTSSGDILLKFKGDKDNV
LRIVKTLKAKTLDPRVKRKGSVLWIGLLGSNAVQFWKLIEPFVLMDLKEYLEAGNELGDG
ALVPKDVYYDKDFDSKGTTNSEPEDEDGSYNFV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgagcaaccatttctgcaacttccacattccacccacgcaaatccagaggccc
tattctgctaaactctaccttcttaattgccgcccctctttccaccgccatcatctctac
tgtgcacccctccccgcaaaatctcatcagaattccacctatccgcttgtctcctcccct
gatgcaatcagcacacttgcatccgactgctcagaagaagctaaagaaagcgaaatcgat
tctttaaaccatttagaagctgaaagtttcaactttcgtgggtcttcagggtcggctgat
ttgaacaaacggtttgattctccggtggttgaagtgaaagagctggaagagttacctgag
cagtggcgaaggtcgaaactggcgtggctttgcaaagagctaccggcgcacaggtcaagt
acgttcacacgggtgctcaatgcgcagcgaaagtggatcaggcaagatgattgcacttac
attgcggttcattgcatgcgaattcgcgaaaatgaggcctcatttagggtgtataaatgg
atgatgcagcagcagcattggtttcggtttgatttttctctggccaccaagttagctaat
tacatgggtaaggaggggaaatatttgaaatgtcaggagatttttgatgatattgttaat
caagggctcgttcctaatgaatccacgtttcatgtgctgattgttgcctatcttagttcc
tctgcctcaaatgctttagatcaagcatgcaaaatttacaattgtatgatccatttagga
ggttacaagcctcgacttagcctccataattcccttttccgagctcttctgaccaaaatg
ggaggttcatgcaaaccatatctcaaacaggcagagtttatatttcataatttggtgact
tgtggacttgaaatacacaatgatatctatagtggacttatatggatccacagttatcaa
gatgaaatagataaagaaagaattgaatctctaagaatggaaatgaaattaaacgggata
gaagagagtgaagaaatgcttgtgtcggtattacgagcatgttcaaaagctggtgatatt
gttgaagctgaaagaacttggactgagattatttcccttaactataaaccctcgaatcaa
gcttatgtgtatctaatggaggtctactcgaaaatagggaaacccatgaaatctctggaa
atttttaggaaaatgcggaaaggacattcctctagcgtagtggcttactacaagattatc
gaggtactgtgcaaagctcatgagatggaactggcggaggctcttatgttagagttcata
gacagtggaatgaaacccctggcgcgatcttttatcgatttaatggttatgtacagtgac
ttaaatttgcacgataaagtggagtcgagttttttgatgtgcctagagaaatgtcgtctt
aaccaggcagtgtattctatgtacttagattcgttagtgaaagtgggcaatcttgacagg
gcagaagagatactcaaccaaatgcacagcgacgaggcaattggtgtcaacgccagatcc
tgtaacacgatcttgaggggctatcttacatgttgcaattatacaaaggcgaaaaatgtt
tataatttaatccgtttgaagaaatttcacattgaaacctctttaatggaaaagattgaa
aagctccagagtttagggcaccaagacatggaaaaatcagtaaagccgaagctcagtaaa
gaacaacgagagaccctggtgggtttactgctcgggggattgaagattgaactagacgag
atggaaaagaatcagaatcaagcaatccagtttgtgttcagggagaacttcaggatccat
tattttttgaagagacacatttacagccagtttcgtgaatggttgtctcatactgaaaag
ctggtggacgaagatggtactggtgaaaacgacgatatcccttgttgttttactacaata
tctcacacatgtttccggttctatgcagaccagttttggccacaaggccgacccgtgatc
cctaagttaattcatcggtgggtgactcctcgtgttcttgcatactggtatatgtattca
ggttacagaacatcatcaggagatatcttgttgaagttcaaaggagataaagataatgtc
ttgaggattgtgaaaacattgaaggcgaagacgttggatcctcgggtgaaaaggaaggga
tctgttttgtggataggtcttttaggaagcaatgctgtgcagttttggaaactaatagaa
ccctttgttcttatggatttgaaagaatacttagaagcaggaaacgagctaggagatgga
gcattagttcctaaagacgtctattatgataaagactttgattccaaggggacgacgaat
tcagaacccgaagatgaggatggctcgtataattttgtttaa
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