KEGG   Primulina tabacum: 142539990
Entry
142539990         CDS       T11246                                 
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate--tRNA ligase, cytoplasmic-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
ptab  Primulina tabacum
Pathway
ptab00860  Porphyrin metabolism
ptab00970  Aminoacyl-tRNA biosynthesis
ptab01100  Metabolic pathways
ptab01110  Biosynthesis of secondary metabolites
ptab01240  Biosynthesis of cofactors
Module
ptab_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    142539990
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    142539990
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ptab01007]
    142539990
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptab03016]
    142539990
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ptab02048]
    142539990
Enzymes [BR:ptab01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     142539990
Amino acid related enzymes [BR:ptab01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   142539990
Transfer RNA biogenesis [BR:ptab03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    142539990
 Prokaryotic type
   Other AARSs
    142539990
Prokaryotic defense system [BR:ptab02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    142539990
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C2 tRNA-synt_1c_C Arc1p_N_like GST_C GST_C_3 tRNA-synt_1e GST_C_6 GST_C_2 YozD
Other DBs
NCBI-GeneID: 142539990
NCBI-ProteinID: XP_075501923
LinkDB
Position
3:8960060..8964097
AA seq 730 aa
MELNFSADSPPLAAIAAAKIAGVSLTSNSTLAPGSTPTLALSNGQRLQGAYVLLKYVGRT
ASIPDFYERDAYQSCQIDEWIDFAPIFGSGSEFEGACSSVDEYLLEHTFLVGNSISIADV
AIWAGLAGTGLRWESLRKSKKYQNLVRWFNSISAEYDGVLSEFLATYIGKRGSGKSIPSN
SKEPQTSSSRSIAKENGVHVDETAGSRSAFQLDLPDAEVGKVKLRFAPEPSGYLHIGHSK
AALSNQYFAERYKGQLIVRFDDTNPDKESSEFVDNLLKDIETLGIKYDAVTYTSDYFPQL
MEMAEKLIRKGKAYVDDTPREKMKEERMDGVESRCRNNSVEENLNLWNEMIAGSERGLMC
CLRGKLDMQDPNKSLRDPVYYRCNLTPHHRIGSQYKLYPTYDFCCPFVDAVEGITHALRS
SEYHDRNDQYHRIQSDMGFRRVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVEGWDDPRFP
TVQGIVRRGLKIEALIQFILEQGTSKNLNLMEWDKLWAINKKIIDPVCPRYTAVVEEQRV
LLILTDGPRDPFVRVLPKHKKYDGAGEKAVTYSNKIWMDYADAESIAVDEEVTLKDWGNA
VVKEIKKDQNGIKTQLVGVLNLKGNVKTTKLKLTWLPDSNELVRLTLVAFDYLITKKKLE
ENEDFVDVLNPCTRKETHALGESDMRNLKRGDIIQLERKGYYRCDVPFIRPSKPMVLFAI
PDGKQQAMTK
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggaactcaatttctccgccgattctcctcctcttgccgccatcgccgccgcgaaaatt
gccggtgtgtctctcacgtcaaattctactcttgctcccggctctacaccaactcttgcc
ttgtctaacggacagaggctgcaaggagcttatgtacttctgaaatatgtgggtaggact
gccagcattcctgatttctatgagagggacgcttatcaatcatgccagattgatgaatgg
attgattttgctcctatctttggttctggatctgaatttgagggggcatgcagctcagtg
gatgagtatttgctggagcatactttcctagtaggcaacagtatttcgattgcggatgta
gcaatctgggctggtcttgcaggaactggtttgagatgggaaagtttgagaaaatctaag
aagtaccaaaaccttgttcggtggttcaactcgatttctgctgaatatgatggtgtgcta
agtgaatttcttgcaacctatattgggaaaagaggctctggaaaatcaataccatctaac
tcaaaagagccgcaaacttctagttctcgatccattgctaaggagaatggtgtccatgtg
gatgaaacagcaggtagccgatccgcctttcagctggatctccctgatgcagaggttggg
aaagtgaagttgcgttttgcaccagaacccagtggttatcttcatataggtcattcgaaa
gcagcattgtcgaaccagtattttgccgagcgatataaaggacagctgattgtgagattt
gacgacaccaaccctgacaaagaaagtagtgagtttgtggacaatcttcttaaagatatt
gaaactctagggatcaaatatgatgctgtgacatacacatcagactactttccccaactc
atggaaatggctgagaaattgatccgtaagggtaaggcctatgtcgatgatactccacgt
gagaaaatgaaggaggaaaggatggatggtgtagaatcaagatgcagaaataacagtgtg
gaggagaatctcaatttgtggaatgaaatgatagctggctcagagaggggattaatgtgt
tgtctacggggaaaactggacatgcaggacccaaataaatcacttcgggatccagtgtat
taccgctgtaatttgactcctcatcacaggatcggatctcaatacaaattatatccaaca
tatgacttttgttgtccgtttgttgatgctgtggaaggcatcacacatgctcttcgatca
agtgaataccatgatcgaaatgaccaatatcatagaattcaatcggatatgggatttaga
agggtccatatatatgaatttagtcggctgaatatggtgtacacacttcttagtaagcgc
aagcttctgtggtttgtccaaaatggcaaggttgaaggatgggatgatcctcgttttcct
acagttcaaggaatagtgcgcaggggcctgaagattgaagcactgatacaattcatcttg
gaacaggggacctccaagaatctcaatctcatggaatgggacaaactctgggcgatcaat
aagaagattattgatcccgtatgtcccaggtatactgcagtggttgaagagcaacgtgtt
ttgctgattctaactgatggtccccgcgatcccttcgtgcgagttttacccaaacacaag
aaatatgacggcgctggagagaaagccgtaacttattcaaataaaatatggatggactat
gctgatgcggaatcgatcgcagttgatgaggaagtcactttaaaggattggggcaatgca
gttgtgaaggaaatcaagaaagaccaaaacggcatcaaaactcagcttgtgggagttttg
aatctcaaaggaaatgtcaagacaacgaaattgaaactcacatggcttccagattccaac
gagctcgtcagattaacgctagtagcctttgactatctcatcacaaagaaaaagctagag
gaaaacgaagatttcgttgatgtgctcaatccctgtacgaggaaggagacacatgcactt
ggggaatctgatatgcggaacttgaagcgtggtgacataatacaactggagaggaaaggg
tattacagatgtgatgtcccttttattcggccttcaaaaccgatggtcctctttgcaatt
ccagatggcaagcaacaagccatgacgaagtaa

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