Primulina tabacum: 142540099
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Entry
142540099 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142540099
KO
K14794
ribosomal RNA-processing protein 12
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142540099
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
90S particles
Other 90S particles
142540099
Pre-60S particles
Other pre-60S particles
142540099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
ARM_TBCD
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
142540099
NCBI-ProteinID:
XP_075502116
LinkDB
All DBs
Position
3:complement(9888526..9899142)
Genome browser
AA seq
1287 aa
AA seq
DB search
MEGLEMEAAHPSEDFCNDVLSQFNDPSNEYHLHICAAVGAMSQELRDQNLPTTHIAYFGA
TCSSIDRISSSEHEPPGHILDSLTTILSIVLKEMPSVVLKMKYGYLSELMVRILRVKSMG
VNGVVPGLKCVSRLLIVREKVEWADVALLYGALIGYITHDRPKVRKQSHSCLHDVLEYFR
LAPGLAPLLTPASEGITNIFERFLLLAGGSKTNTSEGSEGAQEVLYVLDALKSCLPYMSS
KSSNVVLKYFKSLLDLRQPMVTSRITNCLNALCLSSTSEVSGEVLLDLLCSLATSLSSNE
SSADDMTFTARLLETGMKRVYLLNRQICVVKLPVVFNALKDVLASEHEEALVAAVTTFKS
LIHACIDENLIQQGVDQITANINVTSRKSGPTVIEKVCVTIESVLSYHYADVWDKSFQIV
STIFDKLGKDSFLFLKETLKSLADMQKLPDGDFPFRKQLHECVGSALCAMGPETFLSFVP
FQLEVQELSEANLWLFPILKQYTVGANLKFFTETILPMVTAMKRKSALLEQEGKIYSART
VDGIVYSLWSLLPSFCNYPVDTAESFKGLEKAVCTVLREEPDFSGIICSSLQILIQQNKR
ILEGNDLSSNNEISVAEERAIALYTSHVARANLSVLCSSARELLSVLSGVYFKSSNANGG
VLQSTIGELASICDKEVVTRFFKTTMQKLLKVTREAGKSGNSKDSNFMQVDSASDEKSLS
VARAQLFDLAVSLLSGLDASEIDLLFVATQPALKECDGFVQKKAYRVLSLVLKFSDDFIS
RRHEELLSLMIEVLPSCHFSAKRYRLDCLYFLIIHASKDGSEQRRQDITSSFLTEIILAL
KEANKKTRNRAYDILVQIGQACDDEDRGGKKDQLYKFFSMVAGGLAGETPHMISASTKGL
ARLAYEFSDLISATYNVLPATFLLLQRKNKEIIKANLGLLKVLVAKSQAEGLQTHLRSMV
EGLLNWQDSTRNHFKAKVKLLLEMLVKKCGLDAVKEVMPEEHMKLLTNIKKLKERKERTR
SAKTIESRSIVSKATTSRKSGWNHTKIFSDFDEETGSSGDEFADKRSFSSRQSGYSSMLQ
SKASFQSKRKRKAAKSLQEDFFDQLDEDHPLDLLDRQKTRSALRSSKVVEKKSESDDEPD
IDSVGRLIIHENGKKEKGNREQKQGLSSDIEVDGRSEAGSLLSASSSKAQKRRKTLDSGW
SYTGKEYASKKAGGDLKRKDKLEPYAYWPLDRKMVSRRPEHRAAARKGMASVVKLTKKLE
GKSVVNALSIRRTVFNKGKRKGSQKKA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtttggaaatggaggcggcgcatccatcagaagacttctgcaatgacgttctt
tctcaattcaacgacccctctaacgagtaccatctccacatatgcgccgccgtcggcgcc
atgtcacaagaactcagagaccagaatctccccaccacacacatcgcctacttcggtgcc
acgtgctcctccattgatcgcatatcctcttctgaacacgaacccccgggacatatcctt
gactccctaaccacgattctgtccatcgtgctaaaagaaatgccctctgttgttctcaag
atgaagtacggttatttgtctgagcttatggttcggatcctcagagtaaaatctatgggg
gttaacggtgtcgtgccggggttgaaatgcgtctcaaggttgttgatcgtgagggaaaag
gttgagtgggccgacgtggcgcttttgtacggtgcccttattggttacattacccacgat
cggcctaaggttagaaagcaatcacattcgtgtctgcatgatgtcttagagtattttcgg
ttagcgcctgggcttgcaccattgttgacacctgcaagcgaaggaattacaaatatcttt
gagaggtttcttcttcttgctggtggatcaaagaccaatacttcagaagggtccgaagga
gcacaggaggtcctttatgttctggatgctcttaaatcctgtcttccatatatgtcgtca
aagtcctcaaacgtcgtcttaaagtatttcaagtctctcttggatctgagacaacctatg
gttaccagtcgcataaccaattgtctgaatgctctctgtctcagttctactagtgaagtt
tccggagaagtcctacttgatcttttatgctcactagctacttcgctctctagcaatgag
tcatctgctgatgacatgacattcactgctcgcttgctggaaactgggatgaaaagagtt
tatttgctgaacaggcaaatttgtgtggttaagcttccagttgtattcaatgcactaaaa
gatgttttggcttctgaacatgaggaggccttggttgcagcagtgacaacgtttaagagc
ttaatacatgcatgcattgacgaaaacttgatccaacagggtgtcgatcagatcacagcc
aatatcaatgtcacctctaggaagtctggtccgactgtcattgaaaaagtctgtgtaaca
attgaaagtgtgctcagttatcattatgctgatgtctgggacaagtcatttcaaatagtc
tcaactatatttgacaaattaggtaaagattctttcttgttcttaaaggaaacactgaag
agtttagcagacatgcagaagttgccggatggggattttcctttcaggaaacagttgcat
gagtgtgttggatcagctctttgtgccatggggcctgagacttttctgagttttgtacct
tttcaattggaagtccaagagctatctgaggccaatctttggctttttccaattctgaaa
cagtacacagttggggctaatctaaagttttttaccgagacaatcttacccatggttaca
gcaatgaagcggaaatctgccttgcttgagcaagaaggaaagatttattcagctagaacc
gttgatggaattgtgtactctttgtggtcgctgctaccatcgttttgcaactaccctgtg
gatacggctgaaagtttcaagggtcttgagaaagcagtatgtactgttcttcgtgaagaa
ccagacttttctgggattatatgctccagcttgcagattttaattcagcagaataagaga
attttggaaggaaatgatttaagttcgaacaatgaaatcagcgtagcagaggaacgggcc
attgccttgtacacttcacatgttgcaagggccaacttgagtgtgttgtgttcctctgct
cgtgagttgttgtctgttctttctggagtctactttaaatcttctaatgctaatggtggt
gtgttgcagagcacaattggtgaacttgcttcaatatgtgataaagaagtggtcacaagg
ttttttaagactaccatgcagaagcttctaaaggttacccgagaggctggcaagtcaggg
aactccaaagattccaatttcatgcaggttgacagcgcatctgacgaaaagtccctgtct
gtagccagggcacagttgtttgaccttgcagtttcacttttgtcgggcttagatgccagt
gaaatcgatcttctctttgttgccactcaacctgcattgaaggaatgtgatggcttcgtt
cagaaaaaggcctatagagtcctttctttggtattaaagttctccgatgactttatttca
agaaggcatgaagagttattaagtttgatgattgaagtgctgccctcttgtcatttttca
gctaaacgttacagacttgactgtttatacttcttgatcatccatgcttctaaggatgga
tctgaacagagaaggcaggacatcactagttctttcctcactgaaatcatactcgcattg
aaagaggctaataagaaaacaagaaatagagcttatgacattctagtccagattggtcag
gcatgtgatgatgaagataggggtggcaaaaaggatcaattatacaaattctttagcatg
gttgctgggggccttgccggtgaaacccctcatatgatcagtgcttctacgaagggatta
gctcgcttggcttatgagttctctgatcttatatctgccacgtacaatgttcttcctgct
acatttctcctcctgcaaaggaaaaacaaagaaataattaaggctaatttaggattgctg
aaggtattggtggccaagtcacaggctgaaggcttgcagacacacttgcgaagcatggtt
gaaggtctgctgaactggcaagatagcactagaaaccatttcaaggctaaggttaaatta
ctccttgaaatgcttgtcaagaaatgtggactggatgccgtgaaggaagtcatgcctgaa
gagcatatgaaacttctcactaacataaaaaagctcaaggagcgaaaagagaggacaaga
tctgctaaaactatagaaagcaggtcaattgtatcgaaagcaactacatccaggaaaagt
ggatggaatcatacaaaaatattttctgatttcgacgaggaaacagggagcagtggtgat
gaatttgctgataaaagaagtttctccagccgtcagagcgggtattcgtcaatgttgcaa
tccaaagcttcttttcaatccaagagaaaacgtaaagcagcaaagagcttgcaagaagac
tttttcgaccaattagatgaagatcatccccttgacttgcttgatcgtcagaagacaagg
tctgctcttagatcatcaaaggtagtggagaagaagtctgagtcagatgatgaaccagac
atagactctgtagggcgtctaatcattcacgagaatggaaagaaagaaaagggaaatagg
gaacagaaacaagggttgtcctctgacattgaggtagatggtaggagtgaagctggaagt
cttttgtctgcaagctcgagcaaagctcaaaagcggaggaagacattggattctgggtgg
tcatacacgggtaaggagtatgccagtaaaaaggcaggtggtgatttaaagaggaaggac
aagcttgaaccttacgcatactggccacttgaccgtaaaatggtgagccgaagacccgaa
catcgggcagctgccaggaaaggaatggcaagtgtagttaagttaaccaagaagctagaa
ggcaaaagtgttgttaatgcactttccattagaagaactgtgttcaataagggcaaaagg
aaaggcagccagaagaaagcttga
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