Primulina tabacum: 142540446
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Entry
142540446 CDS
T11246
Name
(RefSeq) putative serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
ptab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142540446
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142540446
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142540446
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142540446
03036 Chromosome and associated proteins [BR:
ptab03036
]
142540446
Protein phosphatases and associated proteins [BR:
ptab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
142540446
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
142540446
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
142540446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
142540446
NCBI-ProteinID:
XP_075502719
LinkDB
All DBs
Position
3:complement(12495741..12505393)
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AA seq
538 aa
AA seq
DB search
MDAVNADIASLDAELLQLPELSSLAIKANNYVVENLFDQWLSLPETNSLVKSLLNNAKGG
GSFNVAGTSSTTNVGANNALPSMFPGGSTPPLSPRSSSGSPRIMKHRPGPSAFGSPLKLV
NEPVKELIPQFYFLNGRPPPNELKERCLFRVNQFFYGHMDGLQMNDFKLVTKEICKLPSF
FSTVLFRKIDNDRTGIVTRDAFVDYWINGNMLTNETATQIFTILKQPDLKYLTQGDFKPL
LRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGHLTLRELRRSNLVAAMQH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFS
QVPRKFTSKIEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGAITRNEMQFFYE
EQLHRMECMAQEPVLFEDILCQIVDMINPEDEGYFTLNDLKGAKLSGSVFNILFNLNKFM
AFETRDPFLIRQERENPSLTEWDRFAHREYIRLSMEEDAEDVSNGSADIWDDSLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtcaatgccgatattgcgagcctcgatgctgaactcctgcagcttcccgag
ttgtcttctttggctataaaagctaacaattacgtcgttgagaatctgtttgatcagtgg
ctgtcccttcctgaaaccaattctttggtaaaatctttgctgaataacgccaagggaggt
ggttcatttaatgtagctggtacgtcatctaccacaaatgttggagcaaataatgcactg
ccttctatgtttcctggtgggagtacacctccactttcacctagaagctcatcgggttca
cctcgaattatgaaacataggcctgggccatctgcattcggctctcccctgaaattagtg
aatgagcctgtaaaagagcttatacctcagttttactttctaaatggccgcccaccgcca
aatgagttgaaagagcgatgcttgtttagagtgaatcagtttttctatggtcacatggat
ggactccaaatgaatgattttaaactggtgacaaaggagatttgcaagctcccatcattc
ttctctactgttctcttcagaaagatagataatgatcgcactggaatcgtgaccagggac
gcctttgttgattattggatcaatggaaacatgttgacaaatgaaactgcaacacaaata
ttcacgattttgaagcagcctgatctgaaatatttaactcagggtgatttcaaacctttg
cttcgcgaacttttggcaactcatccggggttggagttcttgcagagtacccctgaattt
caggaaagatatgccgaaacagtgatatacagaatattttactacgtgaatagatcgggt
aatggccatcttaccctcagggagcttaggcgttcaaacttagttgctgcaatgcaacat
gctgatgaggaagaggatatcaacaaagtcttgcggtacttctcctatgagcatttttat
gttatatattgcaagttctgggagctggacacggaccatgatttcctgattgacaaagag
aacctcattagatatggtaaccatgcacttacgtacaggattgttgatagaatattttct
caggtacccagaaagttcacgagtaagattgaaggaaagatgggatatgaagattttgtt
tacttcatattgtcagaggaggataaatcatctgagcctagtctcgagtattggttcaag
tgcatagatttagatggaaatggagctattacaagaaatgaaatgcaatttttttacgaa
gaacagctgcacagaatggaatgcatggcccaagagcctgtgctatttgaggatattttg
tgtcagatagttgacatgattaatccagaggatgagggctattttacgttaaatgactta
aaaggagccaaactctcaggcagtgtttttaatatcctttttaacctcaataagttcatg
gcgtttgagactcgagatccttttctaatacggcaggagcgtgagaatccaagtttgact
gaatgggaccgctttgcacacagagaatatattaggctctcgatggaggaagatgcagaa
gatgtctcgaacggaagtgcagacatttgggacgattcacttgaggctccattttga
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