Primulina tabacum: 142540475
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Entry
142540475 CDS
T11246
Name
(RefSeq) ras-related protein RABF1-like isoform X1
KO
K07887
Ras-related protein Rab-5A
Organism
ptab Primulina tabacum
Pathway
ptab04144
Endocytosis
ptab04145
Phagosome
ptab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142540475
04145 Phagosome
142540475
04148 Efferocytosis
142540475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142540475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142540475
04031 GTP-binding proteins [BR:
ptab04031
]
142540475
Membrane trafficking [BR:
ptab04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
142540475
Endosome - Lysosome transport
142540475
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142540475
Exosomal proteins of other body fluids (saliva and urine)
142540475
Exosomal proteins of colorectal cancer cells
142540475
Exosomal proteins of bladder cancer cells
142540475
GTP-binding proteins [BR:
ptab04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
142540475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
ABC_tran
AAA_7
Motif
Other DBs
NCBI-GeneID:
142540475
NCBI-ProteinID:
XP_075502763
LinkDB
All DBs
Position
3:complement(12733157..12736798)
Genome browser
AA seq
205 aa
AA seq
DB search
MGCSSSVPDKNAGRLGGLNAENGGSNDVNNLKVKFPLSPQLVLLGGSGVGKSCIVLRFVR
GQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYD
ITSPESFTKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVPVQDGNDYAEKNGMFFIE
TSAKTADNINQLFEEIAKRLPRPSS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcgtcatctgttccagataaaaatgctggaaggttgggaggtctaaatgca
gaaaatggaggatcgaatgatgtgaataaccttaaagttaagtttccattatctccacag
ctggtgctcttaggtggttctggggttgggaaaagctgcattgttcttcgatttgttcgt
ggtcagtttgatcctacatctaaggtcactgttggggcatctttcttgtctcagacaata
gccttgcaggattcaactacagttaaatttgaaatatgggacactgctggtcaagaaagg
tatgcagcactggcgcctctgtattaccgaggtgctgctgttgccgtagtggtgtatgac
attactagtcccgaatcattcaccaaggcacaatattgggtcaaggagttgcaaaaacat
ggaagcccagacatagtcatggccctcgtaggtaataaagctgatcttcttgaaaaaaga
gaagtgccagttcaggatggaaatgactatgctgaaaagaacggaatgttctttatagag
acctctgccaagactgctgacaatataaaccagctatttgaggaaattgccaagaggctg
ccgcggccatcttcgtaa
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