Primulina tabacum: 142540599
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Entry
142540599 CDS
T11246
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142540599
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142540599
Enzymes [BR:
ptab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
142540599
Protein phosphatases and associated proteins [BR:
ptab01009
]
HAD phosphatases
Fcp/Scp phosphatases
142540599
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
142540599
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Dicer_dsRBD
Cwc21_C
Motif
Other DBs
NCBI-GeneID:
142540599
NCBI-ProteinID:
XP_075502992
LinkDB
All DBs
Position
3:13754354..13767965
Genome browser
AA seq
926 aa
AA seq
DB search
MKMYSKSVLVYLGDRVLGEVELHPQNGIVFGEEFREIRISHYSQPSERCPPLAVLHTVSA
TGACFKLESSLKSQESPLSVLHATCLRDNKTAVMSIGGGEIHLVAMHSRKCEGQGPCFWG
FNVTPGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKISSESDPHRVS
SMVAEVKRYQDDKNILKQYAESDQVIDNGKVVKSQSEMVPALSDTHEPILRPIIRLQEKS
IVLTRINPLIRDTSVLVRLRPAWEDLRTYLTARGRKRFEVFVCTMAERDYALEMWRLLDP
ESNLINSNKLLDRIVCVKSGSRKSLFNVFHDGSCHPKMALVIDDRLKVWDEKDQPRVHIV
PAFAPYYAPQAEANNTVPVLCVARNVACNVRGGFFKEFDDGLLQQIAEVAYEDDIKNVAF
PPDVSNYLISEDDPSTSNGNKDLHVFNGMADTEVERRLKEAISASSTGPPPTKNLDPRIP
PPLQYTVPSTSFSVPPSTIQGLPVPLTNQQSPQVTSLLKSPLTQVGPAEPTFHISPVTEE
GEVPESELDPDTRRRLLILQHGQDMRGHAPSESQFPARPPMQVSVPAVQPRGWFPGEEEM
SPGHLNQVAPHKEFPLNAESLPIDHHRVHHPPFLHKVEPSIPPGRVLENKRLSQEVLLRD
DLLRLNQQLPGFHSFSDEGGPRRPQPSLVNKDLDLEAGQIDPDPETSTGALQDIALKCGT
KVEFNQALSPILELQFSVEVIFAGQKIGEGFGRTRREAQRQATEVSLMNLADKYLSNLEP
EFSYTTGNDVSPRIPDARVKNSKKSMGSIAALNEFSMKEGLGVAFQNLPQFSANPSLKNE
VYAQVEINGQLMGKGIGRTWDEAKSQAAEKALGALHSMVGQFPHRRHGSPSSLQGLSNKR
LKSDFSRVVQRIPSSNRYPKNASPIP
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtatagtaaatcggtgctggtctatttaggagacagggtgctgggagaagtg
gagttgcaccctcaaaatggaattgtatttggagaggaatttagggaaattcggatatcg
cactattcacaacccagtgagaggtgcccgccactcgccgtgcttcacactgtatccgca
actggagcatgcttcaaattggaatcttccttaaagtctcaggaatcgccgctttctgta
ttacatgctacatgtctcagagataacaagactgctgtaatgtcaattggaggaggggaa
attcatttagttgccatgcattctaggaagtgtgaagggcagggcccatgcttttgggga
ttcaatgttactccgggactttacagttcttgtcttgtcatgctgaatcttagatgtctt
ggcattgtatttgatcttgatgaaactctcatagttgcaaacacaatgcgctcatttgag
gacagaatagaggcgctgcagagaaaaataagctctgagtctgatccgcaccgtgtttct
agcatggttgcggaggtcaaacgttatcaggatgataaaaatattttgaagcaatatgca
gaaagtgatcaggtgattgataatgggaaggttgtcaaatcacagtctgagatggttcca
gcattgtcggacactcatgagcctatcctccgtccaattatacgactacaagaaaagagc
atcgttctgactcgcattaatccattgattcgagacaccagtgtcctagtgagattaaga
cctgcttgggaggatcttagaacctatttgactgctagaggtcgaaagcggtttgaggtt
tttgtctgtactatggctgaaagagattacgcattagaaatgtggaggcttcttgaccca
gagtcaaatttgataaactctaataagctcttggatcgaattgtttgcgtcaagtctggt
tctaggaaatccctatttaatgtctttcacgatggaagttgtcatcctaagatggcattg
gtgattgatgaccgtttaaaagtgtgggatgagaaagatcagcctcgagtgcatatagtt
cctgcatttgctccgtattatgcgcctcaagctgaagccaacaacaccgtacccgtgctt
tgcgttgcaagaaatgtagcttgcaacgttagaggtggattcttcaaagaatttgatgat
ggtctcttgcaacaaattgctgaagttgcatacgaagatgatattaaaaatgtggctttc
ccacccgatgtgagcaactacctgatttcagaggatgatccttcaacctctaatggaaat
aaggatttgcatgtttttaatggaatggctgatactgaggtggaaaggaggctaaaggag
gcaatttctgcttcttcaactggccctccaccgacaaaaaatttggacccaagaattcct
cctcctctccagtacacagtaccatcgacttctttttcagtccctccatcaacaattcaa
gggctgccagtgcctttaaccaatcagcaatcacctcaagtgacgtctttgcttaaatca
ccattaactcaagttgggccagcagaaccgacttttcacatttctcctgtaacggaagag
ggtgaggtaccggagtctgaattagatcctgatacaaggaggagactgctcatcttgcaa
catggtcaagacatgagaggccacgctccatctgaatctcagtttcctgcccgacctccc
atgcaagtctctgttccagcagttcaacctcgtggttggtttccaggtgaagaggagatg
agcccaggacaccttaaccaagttgcgccacataaggagtttcctttgaatgcagagtct
cttcctattgaccaccatcgggttcatcatcctccttttctacacaaagtggagccttct
attccacctggtagagttcttgaaaacaaaaggttgtcccaggaggtgcttctgagggat
gacctgttaaggttaaaccaacagctgcctggctttcattccttttctgatgagggtggt
cctcgaaggcctcaaccatctttagttaacaaggatctagatcttgaagcaggacaaatt
gaccccgaccctgaaacgtctaccggagctttacaggatattgcattgaagtgtggaaca
aaggtcgagttcaatcaagctctatcaccgatcttggaactgcaattctctgtggaggtt
atatttgcagggcagaaaattggtgaagggtttggcagaacaagaagggaagcacagcgt
caggctactgaagtatctcttatgaacttggctgataaatatttatcaaatcttgaacct
gagtttagctacacaactgggaacgatgtgtcaccaaggattcctgatgcaagagtcaag
aactccaagaagtcaatgggatcaatagctgcacttaacgaatttagcatgaaggaggga
cttggtgtagcatttcaaaacctacctcaattttcagctaaccctagcctaaaaaacgaa
gtgtacgctcaggttgaaattaatggacaattgatgggcaagggaattggtcgaacatgg
gatgaggctaaatcacaggctgctgaaaaggcacttggtgccttgcattccatggttggt
cagtttcctcacagacgccatggttctccatcatctttgcagggcttgtcaaacaaaagg
ttaaaatcagatttctctagagttgtgcaaagaataccatcctctaaccgataccctaag
aatgcatctcccataccatga
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