Primulina tabacum: 142540604
Help
Entry
142540604 CDS
T11246
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 3-like
KO
K14485
transport inhibitor response 1
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142540604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142540604
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142540604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
DUF3630
Motif
Other DBs
NCBI-GeneID:
142540604
NCBI-ProteinID:
XP_075503000
LinkDB
All DBs
Position
3:13797916..13802498
Genome browser
AA seq
592 aa
AA seq
DB search
MDPDSKKSKFSPPPNLGNSKAPVPLNSSLFPDELLEKVVSFIDSHKDRSSVSLVCKDWYN
AERWTRSKLFIGNCYSVSPEIVARRFPKIKSVTLKGKPRFSDFNLLPRDWGADVHSWLVM
FAKVYPFLEELRLKRMAINDESLEILAKSFPRFKALSLYSCDGFTNKGLKAIATHCRNLT
ELDIQDIATDDFSGYWLSCFPENFSSLEILNFACLNSEIEFDKLERLVSRCSSLRVLKVN
ESISLDQLQRLLVLAPQLKELGTGSFFPELTPRQYQEVESAFRNVGNLQTLSGLWDVTAS
YLPVLYGACASLSFLNLSDAALQSAAFEKLLAHCPNLRRLWVADTVEDKGLEAVGLRCPL
LEELRVFPSDPYDQHQRHGVTELGFVAVSRGCRKLHYVLYFCRRMTNAAVETIVNNCPDF
THFRLCIMNPGEPDYLTNESMDEAFGSVVKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLE
TLSVAFAGSSDRGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLERYEMMRSLWMSACNVT
MKGCKLLAREMPRLNVEVIKDEESDGFQANKVYVYRSVAGPRRDAPPFVLTL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatccagactccaaaaaatccaaattctcaccaccaccaaacttaggcaactcgaaa
gcgccagttccgttgaattcatcactattcccagatgaattattggaaaaagttgtgtca
ttcattgattcacacaaggacaggagctcggtctccctggtgtgcaaggactggtataat
gctgaacgttggacaagatcaaagctcttcataggcaactgctattcagtgtctcctgaa
attgtggcaagaaggtttccaaaaattaagagtgttaccctcaaagggaagccaagattt
tcggatttcaaccttttgcctagagattggggtgctgatgtgcattcttggttggtaatg
tttgccaaagtttacccctttttggaggaattgagactcaagaggatggctataaatgat
gagagcttggagattttggcgaaatcttttccacgcttcaaagctttgtctctgtatagt
tgcgatgggttcactaacaaggggctcaaagctatagccacccattgtaggaatttgaca
gaacttgacatacaggacatagcaactgatgacttcagcggatattggctaagttgtttc
cctgaaaacttctcgtcactggaaatattaaattttgcatgtctaaacagtgagatcgaa
tttgataagctcgagagacttgtcagtaggtgcagttcattaagggttctaaaggtcaat
gagagtattagtttggaccaactgcaacgtttgcttgtgcttgctcctcagttaaaagag
cttggcactggttcctttttcccagaacttacccctcgacagtaccaagaagttgaaagt
gcatttagaaatgttggaaatcttcaaactctatcgggtttatgggatgtcacagcctct
tatctcccagttctttatggagcttgtgcaagtctgagtttcttgaacttgagtgatgct
gcccttcagagtgctgcatttgaaaagcttctcgctcactgtcccaatttacgacgtctt
tgggttgccgatacagtagaggacaaggggttagaggctgttggtttaagatgtcccttg
ctcgaagaactccgagttttcccttcagatccttacgaccaacatcaacgtcacggagtg
acagagttaggttttgtagccgtgtctcgtggatgtcgcaaactccattatgtcctctac
ttctgtcggaggatgactaatgctgctgttgagaccatagtaaacaactgccctgatttt
acccacttccgtctttgcataatgaatcctggcgagccagattacctgacgaacgaatct
atggacgaggcctttggttctgtggttaaaacttgcactaaactccagcggctttcagtt
tcggggcttttaacagatctgacctttgagtatatcggtaaatatgccaagaatctggag
accctttccgtggcttttgcgggaagcagtgatcgtgggatgcagtgtgttcttgaaggt
tgccccaagcttagaaaactcgagataagggattgcccatttggaaatgctgctctgctt
tctgggctcgagagatatgagatgatgaggtcgttgtggatgtcagcttgtaacgtaact
atgaaagggtgcaagctactggcaagggagatgccaaggttaaacgttgaagtgataaaa
gacgaggaaagtgacggcttccaagccaacaaagtttacgtctatcgttcggtagcaggt
ccgagaagggacgccccgccctttgttcttactctttga
DBGET
integrated database retrieval system
