Primulina tabacum: 142540629
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Entry
142540629 CDS
T11246
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142540629
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142540629
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C4
Motif
Other DBs
NCBI-GeneID:
142540629
NCBI-ProteinID:
XP_075503038
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Position
3:14118603..14120401
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AA seq
415 aa
AA seq
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MDTMTVHIFLAIYQCPQCSSCQTSTMAKPRSNFLLFSWLLVFCMLTFRAHSSQKSSKKPS
FTSTFKVMNKIDSCWRSNPNWAKNRQSLADCAVGFGCGAMGGKNGAIYVVTDASDDPVNP
KAGSLRYGAIQAQPLWIIFERDMTITLKNELMVNSYKTIDGRGAKVEVTGGPCISIDYVS
HVIVHGISVHDCKPGKRGMVRSTPDHVGERLGSDGDSISIFASSNIWIDHCYLARATDGL
VDIIHGSTGITVSNNYFTQHDKVMLLGHQDGFAADRVMKVTVVFNHFGPGLIQRMPRVRT
GYAHVANNRYDQWLMYAIGGSSDPTILSEGNYFVASNDAYAKQVTKRETNNGWKNWKWRS
TNDVFINGAYFVPSGYGSCSPNYSGQQYFAAARGSLVPALTSDAGPLQCRLNVKC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggataccatgactgtgcacattttccttgctatttatcaatgtccccagtgttcttca
tgtcaaacctcgaccatggcgaagccgagatctaatttccttctattttcttggctgtta
gtcttttgcatgctaactttcagggctcattcatcccaaaagagttccaagaagccgtca
tttacgtcaacatttaaggtaatgaacaaaattgattcttgttggagatcaaaccccaac
tgggctaagaaccgccagtcattagctgactgcgcggttgggtttggatgcggtgcaatg
ggagggaagaatggcgccatttatgtggtaacggacgcttcagacgaccctgtgaatccc
aaagcaggctcattgcgttatggtgcgattcaggctcaaccactttggatcatatttgaa
agggacatgactattacacttaagaatgaattgatggtgaacagttacaaaacaattgat
ggtaggggtgccaaagtcgaagtaaccggaggtccctgtattagtatagattatgtgagc
catgttatagtccatgggattagcgtacatgattgcaagcccgggaagaggggtatggtc
cggagcacacccgatcatgttggtgaaaggcttggcagtgatggagattccattagtatc
ttcgcatcatctaacatttggatcgatcattgctaccttgctcgtgcaacagatggtctc
gttgacattatacatggctctactggtataactgtttccaacaattacttcactcaacat
gataaggtgatgttactcgggcatcaagatggatttgcggcggacagggtaatgaaagtt
accgtggttttcaaccactttggccccggattgattcaaaggatgccaagggttagaacc
ggatacgcgcatgttgccaacaataggtacgaccagtggcttatgtatgcaattggtggg
agttctgatccaactatacttagtgaagggaactattttgttgcttcgaatgatgcttac
gctaaacaggttacaaagagggagacaaataatggttggaaaaactggaaatggaggtcg
actaacgatgtatttataaatggagcgtattttgtaccatcgggttacggaagctgctct
ccaaattattcgggacagcagtattttgctgccgctcggggctctttagtccccgccttg
acatcagatgccggtcctctccaatgccgccttaatgtaaaatgctaa
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