Primulina tabacum: 142540825
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Entry
142540825 CDS
T11246
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
ptab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142540825
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142540825
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142540825
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142540825
03036 Chromosome and associated proteins [BR:
ptab03036
]
142540825
Protein phosphatases and associated proteins [BR:
ptab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
142540825
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
142540825
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
142540825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_NOL10_N
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
142540825
NCBI-ProteinID:
XP_075503346
LinkDB
All DBs
Position
3:complement(16404950..16410468)
Genome browser
AA seq
494 aa
AA seq
DB search
MSFSFSSSDVSSLAVSKWKLSQIFGDKLPGEEVQNIDIITAVQFDKSGNHLAVGDRGGRV
VIFEKSDGKEESLKGTSREEFEKTDFVVSRYPKFRYKTEFQSHEPEFDYLKSIEIEEKIK
EIRWCMIPNGSLTGAVKEHRVKQVKKMDISQHISSENSLLGERSFINGESEYIANGHSLE
RKENTVNGVSSFNGVHAKLACLADSTRAMCRKVHAHAHDFNMNSVSINSDGETFISADDL
RINLWNLEISKQCFNIIDTKPENMEALTEVITSAEFHPYHCNLMAYSSSRGFIRLVDMRL
SALCDHSAKILKEESHGPKSFFTEIIAAITDLKFANGGRHILCRDFMNLKLWDVRMDTRP
VATYRIHERLRPKLCDVYNNDAIFDKFDCCLAGDRLNFATGSYSNHLRIFSYGIGSEEGT
TIEVGKNPNRKSLLQPSSRLRRSSLSNLTRGFSREGSNEFGFDFNSKLLHMAWNPTTNLI
ACAAGNTLLMYHHA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagttttagtttcagttcctccgacgtttcctctctcgccgtttccaagtggaagtta
tctcaaatcttcggcgataaacttcccggggaagaagtgcaaaatattgatattataact
gcagttcaattcgacaagagtggtaatcaccttgctgtaggcgatcgcggtggtcgggtc
gtaattttcgagaaatcagatggtaaagaggagtcactaaaaggcacttcacgggaggag
tttgagaaaactgattttgttgtttcgcggtatccaaaatttcgatataaaactgagttc
caaagtcatgagccagagtttgactatttaaagagcattgaaattgaagaaaagatcaag
gaaatcaggtggtgtatgatacctaatggctcattaactggtgctgtcaaggaacataga
gtaaagcaagtaaaaaaaatggatatcagccagcacatatcttcagagaattctctgttg
ggtgaaagaagctttattaatggggaaagtgaatatattgccaatggccattctttggaa
cggaaagagaacacggtgaatggtgtatcatcgttcaatggagtacatgccaagctagca
tgcttggcagattctactcgtgcgatgtgtcgaaaagttcatgcgcatgctcatgatttc
aatatgaactccgtctcaatcaatagtgatggggagacatttatttcagcagatgaccta
agaataaatttgtggaaccttgaaattagtaaacagtgtttcaatatcattgacacgaaa
cctgaaaatatggaagctcttacagaggtgatcacttcagcagaattccatccatatcac
tgcaatctgatggcttacagcagttcgaggggatttattcggcttgtggacatgaggtta
tcagcattatgtgatcacagcgcaaagatattgaaagaggagtcccacggaccaaaatca
ttcttcacagagattattgcagcgataactgacttaaagttcgcaaatggtggaaggcat
attttatgccgcgattttatgaatctgaaactttgggatgtgcggatggatacccgcccg
gtggctacatataggattcatgagcgcctgaggcctaagttgtgtgatgtgtataataat
gatgcaatttttgacaaatttgactgctgtcttgccggagacaggcttaactttgcaacc
ggatcatacagcaatcatctgcgcatattttcatatggtattggaagtgaagaaggtaca
accatagaagttggcaaaaatccaaataggaaatcgcttctccaaccttcgtcaagactc
cgacgatcatcattaagcaacttgaccagaggattttcgagagaaggaagtaacgagttt
ggttttgatttcaattccaagttgctgcatatggcgtggaatcccacaaccaacttgatt
gcttgtgctgccggaaacaccttactcatgtatcatcacgcctga
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