Primulina tabacum: 142540878
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Entry
142540878 CDS
T11246
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Module
ptab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142540878
Enzymes [BR:
ptab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142540878
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
TPS
Motif
Other DBs
NCBI-GeneID:
142540878
NCBI-ProteinID:
XP_075503422
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Position
3:17292570..17296695
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AA seq
401 aa
AA seq
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MFRFFIFALITSSIVTASSAHSAIFSVVDYGAIGDGHSDDTKAFAKAWEATCGSSSSSPR
MHVPRGKAFLIHPISFSGPCKSKGVNIEIDGNVIAPSEPSEWRCGGDSCERWIHIESVEG
LSVGGHGMIDGRGRKWWQAVKQGNRSQGRPTAFEIAKSNNVSLGGGLRFKNSPRMQVVLN
HLNSVHVSNIIVEAPEDSPNTDGIHISGCTDVFIDRSIVGTGDDCISIVDGSSFITISNI
ICGPGHGISIGSLGKHGANGRVEDIKVRDVVFIGTQNGARIKTWQGGKGYARNILFERIL
SHESRNTIVIDQFYCDHEQCGISDLAVQISNVTYRQVLGTSKGEAAVKLDCSKAVPCKDI
VVEDIELVSTDDDKKATFECNNVYGRAQGRRVPYNPCLNLK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttcagattcttcatttttgctcttataacttcatctatcgttacggcatcgtctgct
cattctgcgatatttagcgttgtcgattatggcgccattggcgacggacattccgatgat
actaaggcgttcgcaaaggcgtgggaagcgacttgcggatcttcatcttcttcaccaagg
atgcatgttcctaggggcaaggcgttcttgattcaccccatatcatttagcggcccttgc
aaatctaaaggagtcaatatagagatcgacgggaacgtgattgcgccgagtgaaccttcg
gagtggagatgcggaggcgacagttgtgagagatggatccatatagagagcgttgaaggg
ctaagtgtgggaggtcatggcatgatcgatggtcgtggaagaaaatggtggcaagcagtt
aaacaaggcaaccgaagccaagggagaccaacggcgttcgagatcgcgaaatctaacaac
gtttcgttaggaggaggtctgaggttcaaaaatagtcctcggatgcaagttgtcctcaat
catttaaattcagttcacgtctcaaatataatcgtagaagctcctgaggatagcccaaac
accgatggtattcatatttcagggtgcactgatgtttttattgatcgcagcatcgttggg
actggtgatgattgcatctcaatcgttgatggatcgtcgtttatcacgattagcaacata
atttgtggaccggggcatggaataagcattggaagcctagggaaacatggagcaaatggc
agagttgaggacatcaaagttagggatgttgtgttcataggaactcagaatggtgccaga
ataaagacatggcagggtggcaagggttatgcaagaaacatcctctttgagagaatactg
tcccacgaatcacgcaatacgatagtaatcgatcaattctactgcgatcacgagcaatgt
ggaatcagtgatttggcagttcaaattagcaatgtgacttataggcaagttcttgggacc
tcaaagggagaggcggcagtgaaattagactgcagcaaggcggttccgtgcaaagatatt
gtcgtcgaagacatagaattggtctcaactgatgatgacaaaaaggcgacttttgaatgc
aataatgtgtatggaagagctcaaggaagaagagttccctacaatccttgcttgaatttg
aagtag
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