Primulina tabacum: 142540994
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Entry
142540994 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142540994 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142540994
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
General mRNP proteins
142540994
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142540994
NCBI-ProteinID:
XP_075503635
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All DBs
Position
1:10791249..10801836
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AA seq
584 aa
AA seq
DB search
MDFDEYEYLESTVENPEKERLELKVNGDDDMIEFEEKDLSRKLRQRNNDYDRDDYSRPSK
HPRAGKDDTSNPEKNRVSHHGLSSRDEEIEKDKNNLNLRNRDKEEGSGKERGRNRHRERE
RERERDKENDRNRNKREHIQGFEGVTKREGEQDRLNLRQSDRFSKRLQDEQEREGNDRQL
SVDKDNKERRVDREFADRDRDTRRYKQKKEEGAVADPERDQRTVFAYQITLKASERDVYN
FFSRAGKVRDVQLIMDRNSRRSKGFGYIEFYDVMSVPMAIALCGQHLLGQPVMVKPSEAE
KNLVQSTPVASGEGGLGPYSGGARRLYVGNLPVTIKEDQLRQVFEPFGAVELLQMPTDLG
TGNCKGYAFIQFTRLEDANAAQNLNEQLKIAGRVIKVSAVTDQFGIHNDGANITDLDDDD
GSGLSLNAQSRALLMQKLDRTGTASSPGLSLPSAPIGSSSAHGPPGLAAAVLSIPAVTGP
AIDAVGVPSECLLLKNMFDPNSEAETDFDLDVKEDVQVECSKFGKLKHIYVDKNSAGCVY
LKFENTQSSTAAQRALHGRWFAGKMITASFMVPHDYDAKIPDST
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatacgagtatttggaaagtactgttgaaaatcccgagaaggaacgg
ttggagcttaaggtaaatggcgatgatgatatgattgagtttgaagagaaagatctgagt
cggaagctgaggcaaagaaataatgactatgatcgtgatgattatagtcgcccatctaag
catcctagggcagggaaagatgatacttctaaccctgaaaaaaacagggtatctcatcat
ggtttatcttcaagagatgaagagattgagaaagacaagaataatctgaatctcagaaac
agagacaaggaggaagggagcgggaaagagagaggcaggaacaggcaccgtgaaagagaa
agagagagggagagagacaaagaaaatgatcggaacaggaacaaaagagaacacatccaa
ggctttgaaggggtaactaaaagggaaggggagcaagataggttgaacttgaggcagagc
gacaggttttcaaagaggcttcaagatgaacaggaaagggagggtaacgataggcaactt
agtgtggataaggataataaggaaagacgtgtcgatagggaatttgcagatcgagatcgt
gacaccagaagatacaaacagaaaaaagaggaaggggcagtagctgatcctgaacgagat
caaaggacagtttttgcttatcagatcactttgaaggcaagtgaaagagacgtctataat
ttcttctctagggctggcaaggtcagagatgtacagctaataatggatcgcaattccaga
cgctccaaaggatttggatacattgaattttatgacgtcatgtcagttcccatggctata
gctctctgtggccagcatcttcttggccagccagtgatggttaaaccatcagaggctgaa
aagaatcttgttcaatctactcctgttgcttctggtgaaggtggacttggtccatattca
gggggagctagaaggctgtatgttggcaatctgccagtcactatcaaagaagatcagctt
cgccaggtgtttgaaccttttggagctgtcgaacttttgcagatgcccactgacctaggg
actgggaattgcaagggttatgcatttatacagtttacacgtctagaagatgcaaatgct
gctcaaaatctaaatgagcaactgaagattgcaggtcgagtaatcaaggtttctgctgtc
acagaccaatttggtatccacaatgatggggcaaatattactgatcttgatgatgacgat
ggcagtggcttgtccttgaatgcccagtctcgagcgctactcatgcagaaattggaccgc
accggaactgcatcaagccctggcctttctttaccatcagcaccgattggatcatcttct
gctcatgggcctcctggtttggctgctgcagttctttctattcctgctgttacaggtcca
gccatagatgctgttggtgttcccagtgaatgtctgttgctgaagaacatgtttgaccca
aactctgaggcagagacagactttgatctggatgtaaaggaagacgtgcaggttgaatgt
tcgaagtttggaaaattaaagcatatttatgtggacaagaattctgctgggtgtgtatat
ctgaagttcgaaaatactcaatcttcaactgctgcacaacgagcactccacggtagatgg
tttgctggaaagatgatcacagcctcatttatggttccccatgattatgatgctaaaatt
cctgatagcacctag
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