Primulina tabacum: 142541070
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Entry
142541070 CDS
T11246
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ptab Primulina tabacum
Pathway
ptab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142541070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptab04040
]
142541070
Ion channels [BR:
ptab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142541070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
142541070
NCBI-ProteinID:
XP_075503726
LinkDB
All DBs
Position
3:complement(39908697..39915683)
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AA seq
769 aa
AA seq
DB search
MDPYEKDEAPMLATTFVQSDYGRDSTVRHSSTRTRSASMSIPSNYMDSSEDVNRPVGFTG
PLRNERRNIGVQMTGPLYTSRNHEVVFQPPQSALLQENIESKVERYPSSMDGMANIHWLS
DEYGEKNEHLLKSGQLGMCNDPYCTTCPTYYNAKGRQKHSRTSEIFDAKFHHMFYGDAKG
WAKRMRSFLLPCIPGVMNPHTLFVQRWNKFFVISCLFAVFLDPLFFFLLSVKQDNKCIVL
DWPLTTTMVVLRSMTDFIYLLHILLQFRVAYVAPESRVMGAGDLVDDPKRIARNYFYGYF
IIDVFVVLPLPQIIILLILPHSLGSSGANYAKNLLRTGILVQYIPRLFRFLPLLAGQSAT
GLIFESAWANFVINLLTYVLASHVVGSLWYLLGLQRVNQCLRDACHDSGLTNCMEFIDCG
HGNDFEDFKKDATWDLWKSNVNATACFGQDAFDYGIYQTAVNLTARHNVVTRYVYSMFWG
FQQISTLAGNQVPSYFVWEVIFTMAIIGIGLLLFALLIGNMQNFLQALGRRRLEISLRRR
DVEQWMSHRRLPEELRKQVRAAERFNWAATRGVNEEMLMENLPEDLQREIRRHLFKFVKK
VRIFQLLDEHIIDAICERLRTKTYIKGSKILYRGGLIDKMVFIIRGNLESIEDLNVVPLS
EGDVCGEELLTWCLEHSSVNKDGRRIRIPGHRLLSNRLVHCLTNVEAFVLRASDLEEVTS
LFARFLRSPRVQGAIRYESPYWRGLAARRIQVAWRYRKKRRVSRADEAE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatccttatgaaaaagatgaagcaccaatgctggcgaccacattcgtacaatcagat
tacggcagagactcaacagttcgacattcttcaaccagaacgaggagtgcatcaatgtct
attccttctaactatatggactcttcagaagatgtgaacaggcctgtgggtttcacaggt
cctttaagaaatgaaagacgaaatattggggtacaaatgactggtccgttatacacctcc
cgtaaccatgaggttgtctttcagcctccccaaagtgcattacttcaggaaaatattgag
tctaaagttgaaaggtatccttcttctatggatggtatggctaatattcattggctatca
gatgaatatggtgaaaagaacgaacatctgttgaaatctgggcaactgggaatgtgtaat
gacccttactgcactacatgcccaacttattataatgctaaagggcgtcaaaagcactca
agaacatcagagatatttgatgccaagtttcatcatatgttctatggagatgcaaaaggt
tgggccaagagaatgcgttcgtttctgcttccttgtattcctggagtcatgaatcctcat
acactatttgttcaacggtggaacaagttctttgtgatatcttgcttgttcgctgtattt
ttagacccactattcttttttctactgtctgtgaagcaggataacaagtgcattgtgtta
gattggcccctgacaacaacaatggtggtcttgaggagcatgactgacttcatttacttg
cttcatatccttcttcagttccgggtagcttatgttgctcctgaatctagagttatggga
gctggagatttagttgatgatcctaaaaggattgcccggaattatttttatggatatttc
atcatcgatgtctttgttgtacttccccttccacagatcatcatattattgattctacca
cactccttgggatcatccggagccaattatgcaaaaaatcttttacgcacaggcatactt
gttcagtatattcccaggcttttcagattcttacctttgcttgctggtcagtcggctact
ggcttaatttttgagtcagcatgggcaaattttgtcataaatcttctcacctatgtcttg
gctagccatgtagtgggctccctatggtatctattaggcctacagagagtgaatcaatgc
cttcgagatgcttgccatgactcaggccttacaaattgcatggaattcattgactgtgga
cacggtaatgattttgaagattttaagaaagatgcaacatgggatctttggaagagcaat
gtcaatgcaactgcatgttttggacaagatgcttttgattatggaatttatcaaactgct
gttaatctaaccgctcgtcataatgtagtgacaagatatgtgtactcaatgttttgggga
tttcagcaaattagtaccctggctgggaatcaagttccaagttatttcgtatgggaagtc
atcttcacgatggccatcatcgggataggcctgctgctttttgccctgttaatcggaaat
atgcagaatttcctccaggctcttgggcgcaggaggttagagatatcgttaagacggcga
gatgttgaacagtggatgagccatcgtcgcttgccagaagaactgagaaagcaagtccga
gctgcggagcgttttaactgggccgccactcgaggagtgaatgaagaaatgctaatggag
aatttaccagaagaccttcaaagagaaattaggcgtcatctctttaaatttgtcaagaaa
gtccgaatatttcaactgttggatgaacatatcatagatgctatatgtgagaggctaagg
acaaaaacatatataaagggaagcaaaatcttgtaccgcggcggccttattgataaaatg
gtatttataatacggggaaatttggagagtattgaagatctcaatgttgttcctttatct
gaaggggatgtttgtggagaagaactccttacatggtgccttgaacattcttccgtaaat
aaagatggaagaagaatcaggatcccagggcacagactgctgagcaacaggctggtccat
tgcttgacaaatgttgaggcatttgtgctgcgagcatcagatcttgaagaagttaccagt
ctttttgcaagattcttgagaagcccacgagttcagggtgccatcaggtacgaatcacct
tactggcgaggacttgctgccagacgaatacaagttgcgtggaggtataggaagaaacga
cgtgttagtcgtgctgatgaggccgaatga
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