Primulina tabacum: 142541151
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Entry
142541151 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142541151 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142541151
03015 mRNA surveillance pathway
142541151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142541151
03041 Spliceosome [BR:
ptab03041
]
142541151
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142541151
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
142541151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
142541151
NCBI-ProteinID:
XP_075503888
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All DBs
Position
3:complement(49461260..49467899)
Genome browser
AA seq
916 aa
AA seq
DB search
MSGGFFRGTSTDQDTRFSNKKAKLLKSKKFASELETLVDMTKVKMDVMRPWIAKRVTELI
GFEDEVLINFIYGLLEGKEVNGKEIQISLTGFMERNTGKFMKELWLLLLSAQQNFSGIPQ
QFLDAKEEETKKKKADTDRIAHEILRKKEKEEQEFERETAKMVLDGDGDTLRDKAAELEL
NSKPDSMVSSFQPADENKQRERKSMRGRFSPTRNCFLNRDSKSPHLGYHSSSPSDRWSSR
SVSRSPPRNSRSMSSERRYPTSPRQSPTPRKRHVVQPSPSPPRRRSFYSKRRSISPPRRR
SPSPSRYRARLPRRNRSRSPLSHRSRSPFNRRSRSPRRRSRTPIRTSTAHHKFPSPFRRR
SPSPLRHRAPSPVRRKSPSPARRRSPSPLKRRTSSPLSDKSPSHGQRRSPSALHHRPRSP
FHRKPPYVGRESRSPVRRRYQRSPSTPRQQSISPARRMSSMIGRKKSLSPVPRRSPRESS
SPSSIQRNSISPVWRESSKSMRSPQQSHGERVRSLEKNSPAHFTSPSERAELSAKNHRGS
KPVDVRPIISLRSPQRDMLDQNDLHGKEPALSLSKKKTPLVSDASRERAHCEEQRSSIPR
DSLHQRMERVIRPESPIPMVKAAGPKHHSDHYGASVEDKNFSAREIREQKYGRGTISLTS
DQRKDLIDSTQVHVLDDVSKSKKSQLTSSEGIPDRMNRRERYEKPESSEIRKTTTASEKK
SESYVDEGDRAGDVNSVPLGDSKRDYRLQESAVLPKLSRKSELNDLNGSADSPSKEFDEH
KTKVKEKKKRSKSDRHDVESDDSSSDDSYEERKEVKRRRKEEKKLKREERRRRRDERHRR
KEERRAEKWKLKSMDTGKPLSDLEGDYSEDDNDHKRLSQTRGNKDTKSEQKNLEIELREK
ALESLRAKKGIGNSKD
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattttttcggggcacgtccaccgatcaggacactcgtttctcgaacaag
aaagcaaagcttcttaaatctaaaaaattcgcctctgaattggaaaccctggtggacatg
acaaaagtgaagatggatgttatgaggccatggatagcaaagcgtgtcactgagctaatt
gggtttgaggatgaagtacttatcaactttatctatggacttctagagggaaaggaagtt
aatggaaaagaaattcaaatttcacttactggatttatggagagaaacactggaaagttc
atgaaagaattatggttgttgcttctaagtgcgcagcaaaatttcagtggcattccacag
cagtttcttgatgcgaaggaggaggaaactaagaagaagaaggctgatacagatcgtata
gctcatgaaattctaaggaagaaagagaaggaggagcaagaatttgaacgcgagactgcg
aagatggtattagatggtgatggtgatacattgagagataaggctgctgagttggaactc
aattcaaaacctgattccatggtgtctagctttcagccagcagatgagaacaagcagagg
gaaagaaaaagcatgagagggcgctttagcccgacaaggaattgtttcctcaacagggat
tcaaaatctccacatttgggttatcattcctcctctccaagtgacaggtggagttcaaga
agtgtttctagatcacctccacggaatagtcggtcaatgtcatctgaaagacggtatccc
acttctccaagacagtccccgactcctcgcaagaggcatgttgttcagccctctccttct
ccaccaaggcgtagatcgttctattctaaacgaagatcaatatctcctccacgacgtaga
tctccctcccctagtagatatagagcgcgtttacctaggcgaaacagatcacggtctcca
ttgagccatagatcacgatctccctttaatcgaagatcacgatccccaaggcgtcggtcg
aggacaccaatacggacctcaacagcacatcataaattcccctctccttttcggcgtaga
tcaccctctcctttacggcatagagctccatctcctgttcgacgcaaatcaccatctcct
gcacgacggaggtcaccgtctcccctaaaacgcaggacatcatctcctttaagtgacaaa
tcaccatcacatgggcagcgtaggtccccatctgccttgcatcacaggccacgatctcca
tttcatcggaagcctccatatgttggtcgggagtcacgatctcctgtaagaaggcgatac
caacgatctccttcaactccgcggcagcaatctatatcaccagctcggcgtatgtcctcg
atgatcggtcgaaaaaaatctttatccccagtccctcgaagatctcctcgagaatctagc
tctccctcttccattcaacgcaattccatttctcctgtttggagagaatcttcaaaaagc
atgagatcacctcaacaatctcatggagaaagggtcagaagcttagagaaaaattctcct
gctcattttacttctccaagtgaaagagctgagctctctgccaagaatcatagaggatca
aaacctgtggacgttagacccatcatttctttgagatcaccacagagggatatgctggat
caaaacgacctccatgggaaagagccagcactgtcactttccaagaaaaagactcctctt
gtatcagatgcttctagggaaagagctcactgtgaagagcaaaggtcgtctattcctcgt
gatagtcttcatcagcggatggaaagagtcattcgtcctgagagcccaatccctatggtg
aaggctgctgggcctaaacatcacagtgatcattatggggcaagtgttgaggataagaac
ttctctgccagggagattagagagcaaaaatatggacgtggaacgatttctctgacatcc
gatcaacgtaaagatttaattgactctacccaagttcatgttcttgatgatgtctcaaag
tcaaaaaaaagccaattgacaagcagtgaaggaatacctgacaggatgaatcgcagagaa
cgctatgagaaaccagagtcatcagaaattcgtaaaacaactaccgcgagtgagaaaaaa
agtgagtcatatgttgatgagggtgacagagctggcgacgtgaatagtgtccctttaggt
gatagcaagagagattataggttgcaagaatcggcagttttgcccaagttgtcaaggaag
tctgagctgaatgatctgaatggttctgcagattctccctccaaggaatttgatgagcac
aaaactaaagtcaaagaaaagaagaaacgcagcaagtcagataggcatgatgtggagtcg
gatgattcttccagtgatgattcttacgaggagagaaaggaggtcaaaaggaggagaaaa
gaggaaaaaaagctgaaaagagaggagaggcgtcggagacgagacgagcggcatcgtaga
aaggaagaaaggcgtgcagagaagtggaaattgaagtcaatggacaccggtaaaccatta
tctgatcttgagggagattattcagaagatgacaatgatcataaacggttgtcgcaaaca
agaggaaataaggatactaaatccgagcagaaaaacctcgagatagagttacgtgagaag
gctcttgagtcacttcgagccaaaaaagggatcggcaattcaaaggattga
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