Primulina tabacum: 142541155
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Entry
142541155 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142541155 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142541155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142541155
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142541155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142541155
NCBI-ProteinID:
XP_075503901
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Position
1:10993068..11015710
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AA seq
1972 aa
AA seq
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MPPMATTANPNAGGQYLSSTKTVDASLWWDPFSSLLTELESSTLPSQSLAKKLKDNHAWF
LCSISQFKQPNQKSREALDSSSVKIGSHELNINPKLKDIACKISTVMCLDEVQSYIVVTR
SAEHNNLFFGDMDCDILNPVILEYYTERQCLLKCIRQIFMRALYSGSESGESAVMEEAQM
LISDELESILLSNLSDLVSFNRIEHMVNSLDVDLYTFWAEEMLIEDNLILDILFLAYNES
FHVCDAKSWKKLCALYEDIVTGFCNFQKLAISPEATCAIYHAKVQLLLILIEALNLDNLL
HMIHDNIPYRQGHIAFSEIDITDMDSIISSFNAIEVKEVGPLILAWAVFTCLISSLPKRE
ETNMLMEVNHIGYVRQAFEVSSLGYFLEILQSDTLKDPEGPLIGYRSVMRTFISAFIASY
EISLQFEDNNFKSILDILYNIYRGEELLCIQFWDRDSFIDAPIRCLLCNLEGEFPYRTVE
LVRLLSALCEGAWPSECVFNFLNKSVGLSTPMEISNGSEVDAVSKVVETHFPLHVTGVEG
LVIPSKSQGQVLRMIDKNVALVRWEYTESGVVVLLLRLAQELYTKNFEEVHAILDLLSRL
VTFNMAVCYALMDAGKSFLNDVSMLRNQEKYIRIDVVEIVCFLVKSLSPCVNSAVTMALG
INILAKMLKCLPSRVATMVLKVDIFDVDVVSNSSSSRSWLLSGRLAKMLLIDCEQIDCSL
SLSVLDFTMKLLDTGLENDSVLALIVFCIQYVFVNHESWTFKVKHTRWNVTVKVLEVMKK
CIQSFSCYKKLGDIIRDILLGDSSVHAVLFRIVCRTTESLERLYVSRFFDIVDIEGLQLS
ISAGLDVLISLVSAFSKDPPSFPVFHHAILSSVTKPMPAITAATSLISYFSDPKIQIRAA
RLLSALFTADFSQSLTYSNASLGLDNKQLSSFRKSMVKILGEQLYLDEDLIVAALKLLTS
AVLNQPAFLTAVIVSEEISNDEPHTADSEHQLNKNENGSLDSTHGSVLDSILHLVRNSED
LLKRKPNILLSLMKFLRALWQDAPQFTNILEQLKHSDKFWKLLTSPVMLNTCYQDKVSEK
LTEEELQCQAYRYQYVSNVLDIMGHEIFLQKKLMHGELVVNGFPKSEANVTERKDSEIAE
NKSFISLKEIISTWCESSLLSDLIKACVSSEYDNKIHRHAKAAAALCVVHVMIKLKNGDS
GSFSVSLIERIAMLAQKLRKLPAFFDLSSLYAERGYSEGQELDYLILGDLFYHIKGEIDG
RHIDNRLFKELLQFLLESEFLDTYRYWNDDDILADNNDVVYHYDSVHLRADLGLETWDLL
AWIETKEVAETALLCWHRVNLMIMHSHSKLSALRGIISLFYMHGDNFTKVENFTQLKISE
QLVLSCINHICQCLHAMLESLTDVPDTDEDGLTILTAQAELLLLLTRFPSKDFSRSAFVA
IVKTSGYGLKVLCSYRKSVGVIRGKKVFLTLILTSVELNFKDLHSGPVEVSPEESNASLR
LLPVLCDCIEHKDCFTLSLTAIDFILGSFSNPATWFPVIQKHFPLQHIVQKLRDTTSSKT
VSVILKFLLNFARVREGAEMLVNAGVVASLRMLLSDCSGGVSFPVVQCTSFSNISEKTEK
PQPIWGLSLAVLASVIQSLENSSSASIVDYVLSSILVDKAPLILLYLSAPDFPFEGHEKK
RARASKSIITLHELDETQNTMTLICILARHWNSWNKALKNIDSQLREKIIHFLAFISRAT
QRPGESLRRDSPLLCHPVLKEEFEWYNEPSFINSRNGWFALSALGCELNHKFPALSSKNT
LVVRDQSGDKADIAPQTHFSDLIAIEIYKIAFLLLKFLCIQAESASRTAEEVGFVDLAHF
PELPMPDILRGLQDQGISIVTELCTACKTKPLTREIQNTCGLMLQITVMALHLEYCVIQI
CGIRPVLGHVETFSKELRLLIRATEGHLFLKESLRDLRQIVSYVYPELEASY
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaatggcgacgacggcgaatccgaacgccggcggccagtatctcagctctaca
aaaaccgtcgacgcttctctatggtgggatccattcagttccttgctcactgaacttgaa
agttccacactcccatcccagtctctggcgaagaagttgaaggataatcacgcatggttt
ctgtgctccatttctcaattcaagcagccgaatcagaagtccagggaagcgcttgattca
agcagtgtcaagattggctcgcatgagctgaatattaatcctaaattgaaagacattgcg
tgcaaaattagtaccgtcatgtgtttagatgaggtgcagtcatatattgtcgttacaaga
tcagcagagcacaataatcttttcttcggtgatatggattgtgacattttaaatccagtt
atacttgagtactacactgagcgacaatgcttgttgaagtgcattaggcagatcttcatg
cgtgctttatattccggatctgaatctggagagtctgctgtcatggaggaggcgcaaatg
ttgatttctgatgaacttgaaagtatactactttctaacttatcggaccttgtctctttc
aaccgcatcgaacatatggtgaattcactggatgtggacctttacactttctgggctgag
gagatgcttatcgaggacaacttgatacttgacattcttttccttgcttataatgagtct
tttcatgtttgtgatgctaagtcatggaaaaagttatgtgcgctatatgaggacatcgtg
actgggttttgcaactttcagaaactagcaatatctcctgaagccacctgtgctatttat
catgccaaagtacagctgctactaattctcattgaggctttgaacctagacaatcttctt
cacatgatccatgataatattccatacaggcagggtcacattgccttttcagagatagat
attacggacatggactccattatttctagttttaatgctattgaggtcaaagaagtgggc
cctctaatccttgcgtgggctgtgtttacctgtctgatctcgtctcttccaaaaagagag
gaaactaatatgctgatggaggtcaatcacattggttatgttcgtcaagcttttgaggtt
tcatctttaggttattttcttgaaattcttcaaagtgacacattgaaagatcctgaaggt
cctttaattggctataggagtgttatgagaacattcatatcagcatttattgcatcttat
gaaattagtcttcagtttgaggataataatttcaaatccatattggacatcttatacaac
atctaccgtggagaggaattgctttgtattcaattttgggacagggatagtttcattgat
gctcctatcagatgtcttctttgcaatttagagggtgaatttccttacagaactgttgaa
cttgtacgtttgttgtcggccctttgtgaaggtgcttggccatctgaatgcgtatttaat
tttctcaataagtctgttgggctatcaactccaatggagataagcaatggctcagaggtg
gatgctgtttcaaaggtggttgaaactcattttcccttgcatgttactggtgttgaaggc
ttagtaatacccagcaaatctcagggccaagtgttgagaatgattgacaaaaatgttgct
cttgtgcggtgggagtacactgagtctggagtggttgtgctgcttttgcggttggcccaa
gagctgtatacaaaaaactttgaggaggtccatgccattcttgatttgcttagtcgattg
gtgacgtttaatatggctgtgtgttatgctctcatggatgctgggaaatcttttcttaat
gatgtatctatgctaaggaaccaggagaaatatattcgaattgatgtggttgagattgtt
tgttttctggtcaaaagcctctcaccttgtgtgaacagtgcagtaacaatggccttgggg
atcaacatattggcaaaaatgttgaaatgcttgccatctcgtgttgctactatggtcttg
aaggtcgacatatttgatgttgatgtggtctccaacagttcatcaagcagatcctggttg
ctttctggaagacttgccaaaatgcttttgattgattgcgagcagattgattgctcattg
agtctttcagttctggactttacaatgaagctcttggacactggattagagaatgattct
gtccttgcgctcattgttttctgcattcagtatgtttttgttaaccatgaatcctggact
tttaaggtgaaacatactcggtggaatgtgacagtgaaggttcttgaagtcatgaagaaa
tgcattcaatccttttcttgttataagaaactgggtgatattattcgtgatattttgctc
ggtgattcttccgtgcacgctgtactctttcgaattgtttgtagaactaccgagagctta
gagagactttacgtgtcccgtttctttgacatcgtggatattgaggggctacaactttct
atatccgctggattggatgtccttatcagtttggtttcggctttttcgaaggatccacct
agttttcctgtttttcatcatgcgatcctatcatcagtgacaaagccaatgccggcgata
actgctgccacatcgttgatatcgtactttagtgatcctaagatacagatacgggcagca
aggttgctatcagctttatttactgcagatttttcgcaatctttaacctacagcaatgcg
agtcttggtttggataataagcagttgtccagtttcaggaagtccatggttaagattctc
ggtgagcaattatatttggatgaagatcttattgttgccgcactgaagctcctcacttcg
gcagttcttaatcagcctgcttttctcactgctgtcattgtgtctgaagaaatttcgaat
gatgaaccccacactgctgacagtgagcatcagctaaataaaaatgagaatgggtcttta
gattccacgcacggaagtgttttagattctattttgcatcttgttagaaactctgaagat
ttactcaaaagaaaacccaatatcttgttgagtttgatgaagttcctaagggcgctgtgg
caagatgctcctcagtttacaaatattttggagcagttaaaacattcagacaagttctgg
aaactactgacgagtcctgttatgctcaacacttgttatcaagacaaagtttctgagaag
ttgactgaagaagagcttcagtgtcaagcttacagatatcaatacgtatcaaatgtatta
gatataatgggccatgagattttcctgcaaaagaagttgatgcatggtgaattagttgtc
aatggattccctaaatcagaagctaatgtgaccgaaagaaaggactctgaaatcgccgaa
aataaaagttttatcagcctaaaggagataatttcaacctggtgtgagagttcattgttg
agtgacctgatcaaggcatgtgtttctagtgaatatgacaacaaaattcatcggcatgca
aaggctgctgctgctttatgtgttgttcacgtgatgatcaaattaaagaatggcgattca
ggaagtttttctgtatcattgattgaaaggattgcaatgctggcacaaaagttacgcaag
ttgccagcatttttcgatttgtcatctctgtatgcagaacgtggttacagtgaaggacaa
gaattggattatttgatcctcggcgatctattttaccatattaaaggagagattgatggg
cgccatattgacaacaggctttttaaagaacttttacagtttttgctggagtcggagttc
ttggatacctatagatattggaacgatgatgatattttggcagacaataatgatgttgtc
taccattatgattctgtccacctcagagcagatttgggattagaaacgtgggatctgtta
gcatggatagaaactaaagaagttgcagaaactgcgctcctttgctggcatcgcgtgaat
ttaatgataatgcattcacattccaagctttcggctttgagagggataatttccctattc
tatatgcatggagacaatttcaccaaggttgaaaattttacccagctaaaaatatctgag
caattggttttatcatgtatcaaccatatttgccaatgtcttcatgccatgctggaatct
ttgactgatgttcctgacactgatgaagatggtcttactatccttactgctcaagcagaa
ctacttctactcctcacaagattcccgagtaaagatttttctcgatccgcttttgttgcc
attgtaaaaacctcaggttatggtctcaaagtgttgtgcagctacagaaaatcagttggt
gtcattagaggcaagaaagttttcctcacgttgattcttacttctgttgagttgaatttc
aaggacttgcattccggacctgtggaagtctctcctgaggaatctaacgcaagtttgaga
ttattgccagttctttgcgactgcattgaacataaggattgttttaccttgtccttgact
gccattgattttatattgggaagtttctcgaatcctgctacttggtttcccgttatacag
aaacattttcctctgcaacatattgttcagaagcttcgagatacgacctcatccaaaacc
gtttctgtgatactaaaatttcttttgaactttgcacgtgtgagagagggtgctgagatg
cttgttaatgctggtgttgttgcatctttaagaatgcttttgtccgactgttctggaggt
gtgtctttccctgtggttcaatgtacaagcttctccaacatctccgagaaaactgaaaaa
cctcagcctatttggggtctcagcctggctgtgcttgcatcagttattcagtctttagaa
aatagttcttctgctagtattgtggactatgtgttgtcttccatattggtggataaagcc
cccctgattttgctttacctaagtgcaccggattttccatttgaaggccatgaaaagaaa
agggctcgggcttcgaaatctattattactttacatgagctcgatgaaacccaaaatacc
atgactctgatctgcatcttagcaagacattggaattcatggaacaaagccttgaaaaac
atcgactcccaattgagggagaaaattattcattttttagctttcatcagccgggcaact
cagcgacctggagagtcactgaggagagactcccctttattgtgtcaccctgtgctcaaa
gaagagttcgagtggtacaacgagccatcatttatcaacagcagaaatggctggttcgca
ctgtctgctctaggttgcgagttaaatcataaatttcccgcgttgtcttccaaaaataca
ttagtggttagagatcagtctggtgacaaagctgacatagctccccagactcacttctct
gacttaattgcaattgaaatatacaagattgcatttcttcttttgaagtttctatgtata
caagctgaaagtgcttcaagaacagcagaggaggtcggttttgtcgaccttgcacatttt
ccagagcttccaatgcctgatatcttgcgtggcctgcaggatcaagggatttcaatcgtg
actgaactatgcacagcctgcaaaacaaagccgcttacacgagaaatacagaatacatgc
ggcttaatgttacaaataaccgtcatggcattgcacttagagtattgtgtcatacaaata
tgtggcatcaggcctgtattaggccatgttgagaccttctcgaaggaacttcggttgctg
attagagcaacggagggccatctcttccttaaagagtcattacgagatctgaggcaaata
gtatcttatgtctatccagaattagaagcctcctattga
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