Primulina tabacum: 142541287
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Entry
142541287 CDS
T11246
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142541287
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142541287
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
142541287
NCBI-ProteinID:
XP_075503983
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Position
1:733581..735332
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AA seq
415 aa
AA seq
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MSNITINSSLSLFFFYFFFFFFLFLISHPVLSTFSHVQDPDLVVQDVHQSINASRRNLGY
LSCASGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAGGGRDGRIYVVTDPGDDDPVNPR
PGTLRHAVIQNEPLWIIFKRDMVIRLNQELVMNSHKTIDGRGASVHISNGPCITIHYASN
IIIHGIHIHDCVIAGNGIIRDSPQHAGHWEVSDGDGIVIFAGKNIWIDHCSLSNCNDGLI
DVIHGSTAVTISNNYFTHHDKVMLLGHSDAFGQDKNMQVTIAFNHFGEGLVQRMPRCRLG
YFHVVNNDYTHWEMYAIGGSASPTIYSHGNRFLAPNDRFRKEVTKHEDAPESKWKHWNWI
SEGDLMLNGAFFRQSGGGAWAACSRASSLSARPVSLVGSVTRTAGALNCRAGSRC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatatcaccattaattcctcgttatcgttattcttcttctacttcttcttcttc
ttcttcctattcttgatatctcatccagtgctctccacattctctcatgttcaagaccct
gatctcgtggtacaagatgtgcatcagagcattaatgcgtccagaagaaacttaggctac
ctctcttgcgcttccggcaaccccatcgacgactgctggcggtgcgatcccaactgggag
aaaaaccgccagcgtttagccgactgtgctatcggcttcggcaagaatgcaggtggtggc
agagacggccgcatctatgtcgtcactgaccccggggacgatgatccagtgaacccacgg
cctggtaccctccgccatgctgtgatccaaaacgagccgctatggataatcttcaagcgc
gacatggtcatacggctaaatcaagaactcgtaatgaactcccacaaaaccatagacggc
cgcggcgccagtgtccatatatctaacggcccatgcattactattcactacgcgagtaac
ataattatccatgggattcacatacatgactgtgtgatagccgggaatgggattatcaga
gattccccgcagcatgcagggcactgggaggtttctgatggagatgggatcgtcattttc
gccgggaaaaatatctggatagaccattgctcgttgtcgaattgcaacgacgggctgata
gacgtgatccatgggtcgaccgcagtcacgatttcgaataattatttcactcatcatgat
aaggtgatgttgttaggacacagtgatgcgtttgggcaggataagaatatgcaggtgacc
attgctttcaatcattttggagaagggctggttcaaaggatgcctaggtgtaggcttggg
tattttcatgtggtgaacaatgactatactcattgggaaatgtatgcaattggtggaagt
gcttctcctaccatttatagccacgggaacagatttcttgcacccaatgataggtttaga
aaagaggtgacgaagcacgaggatgcgccggaaagcaaatggaaacactggaactggata
tcggaaggcgatctgatgttgaacggtgcctttttccggcaatcgggaggtggagcttgg
gcagcatgttcgagggcatcaagtttaagtgctaggccagtttctctcgtgggttcagtc
accagaactgctggggcacttaattgcagggctggatctcgttgctag
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