Primulina tabacum: 142541965
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Entry
142541965 CDS
T11246
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ptab Primulina tabacum
Pathway
ptab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142541965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142541965
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
142541965
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
142541965
NCBI-ProteinID:
XP_075504526
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Position
1:13363435..13371774
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AA seq
915 aa
AA seq
DB search
MDAAAERHNGDASAKRFPATSPSDLFRKGRKRLKLSEGIGYNDSTFTASWRFDAEQKRKE
SCSKVLDYTDPLCSNNLLTELDSGKFGSVTSDIKELLARRRKLLASDYGKDSSLPYMCFD
VQAKVAPRATETAALDVIDLDDDQEDGSNAIVQRFTTSVQPPHLAGPVVIIDLDDDNDIR
SENFTSPYVEVNLKPSGKLLMKDFLDKTFSQHHSSGERNACISGKTPLLLEDKSVSIFGT
EDDMEMDENSEMSDTNSDGLGYIWNEMTVALECSKEANEVPDEHEAESEIECQHTFILKD
DIGDVCRICGVIKRGIETIIEYNFSKSTRSTRTYHYEGRTSRDIEDILPDGFKPSGCDFT
ATEIYPHPRHKKEMKPHQVEGFNFLVSNLVAENPGGCIMAHAPGSGKTFMIISFLQSFMA
KYPSARPLVILPRGILAIWKKEFLRWQVEDIPLYDFYSVKADSRAQQLEVLKQWSEVRSI
LFLGYKQFSSIVCDTDNGKTAVACQQILLICPSILILDEGHTPRNQDTDVLTSLERVQTQ
RKVVLSGTLYQNHVKEVFNILNLVRPRFLKMETSKAVKRRILSRAEISTRRNLMKSGREN
EFYELIEHTLLKDENYTRKVTVIQDLREMTKKVLHYYKGDNLDELPGLVDFSVFLQLSPW
QQKEVKELKRLARKFTINAQGSAIYAHPKLKALSQNSGVKDRIDEAKIDTILEKLDVREG
VKSKFYLNLLQLCASNSEKLLVFSQYLLPLKFLERLTSKMKGYRIGIEMFMITGDSDAET
RESYMEKFNTSADARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQ
VRKVYTYRLIASGSPEEADHTTCFRKESIAKLWFEWDEFNGRQNLEMETVNVNDCGDMFL
EMERLNEDVTAVFKR
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctgctgaaagacataatggggatgcctctgcgaaaaggtttccggccact
agtccaagcgatttgttccgaaaagggcggaaaaggttaaaattaagtgagggaattggg
tacaatgacagtactttcactgcttcatggcgatttgatgctgagcagaaaagaaaagaa
tcatgttccaaagttttagattacactgatccactatgttcaaacaatttgcttacagag
ttggattctggaaaatttgggagtgtaaccagtgatattaaggagcttcttgctcgaagg
aggaagttgttggcctctgattatggaaaggattcttcactaccatacatgtgttttgat
gtgcaagctaaagtggcaccaagggcaactgaaacagctgcacttgatgtcatcgaccta
gatgatgatcaagaagatggaagtaatgctatagtccaaaggtttactacatctgtgcag
ccaccccatctggcgggcccagttgttatcattgatctagatgatgacaatgacatcagg
agtgagaactttacttctccttatgtggaagtgaacttgaagccttctggaaagcttctt
atgaaggatttcttggataaaactttttctcaacaccatagttctggagaaagaaatgca
tgtatttctggtaaaaccccattattattagaagataaaagtgtgtctatttttggtacg
gaggacgacatggagatggatgaaaatagtgaaatgtctgacaccaattctgatggtctg
ggttacatttggaatgagatgacagttgcattagagtgttcgaaggaagccaatgaagtt
cccgatgaacatgaagctgagagtgaaattgaatgccaacatacttttatactgaaagat
gatattggtgatgtctgccgcatttgtggggttattaagagaggaattgaaacgattatc
gagtacaacttctccaagagcacaaggagcacaaggacttaccattacgaagggcggaca
tccagagatatagaagatattctcccagatggatttaaaccatctggttgtgatttcact
gctaccgaaatttatccacatccacgacataagaaggagatgaagccacatcaagttgag
ggattcaattttttagtaagcaacttggtagcagagaatcctggaggttgtatcatggca
catgcccctggttctggcaagacatttatgataatcagtttccttcagagtttcatggca
aaatatccatctgccaggcctctagttattctaccgaggggaattttggccatttggaag
aaagaatttcttagatggcaagttgaagacataccattgtacgacttctactccgtcaaa
gctgatagtcgtgcacagcagcttgaagttctgaagcaatggtcggaagtgagaagcata
ttgtttttgggttataaacagttctcctctattgtatgtgacaccgataatggtaaaact
gctgttgcatgccaacagattttactgatctgtccttcgattctcattttggatgaaggg
cacactcctcgaaaccaggacactgatgttttaacctcactggaaagggtgcagactcaa
aggaaggttgttctttctggaacattgtatcagaaccatgtaaaagaagttttcaatatt
ttaaaccttgttcgcccaaggtttttaaaaatggagacatccaaagcagtgaagaggcgt
atcttgagcagggcggaaatttccacccgtaggaacttgatgaaaagtggtagagagaac
gagttctatgaattgatagagcacacactgttaaaagatgagaactacactaggaaagtg
actgttatacaagatctccgtgaaatgacgaaaaaagttttgcactattacaagggtgac
aatttagatgaacttccaggacttgtggatttttcagtgtttctccagctcagtccctgg
cagcaaaaagaagttaaagagctaaaaaggctggcaagaaagttcacaatcaatgcacag
ggcagtgcaatatatgcgcatccaaagttgaaggctctctcccagaattccggtgttaaa
gatagaatcgacgaggcgaaaattgataccatactggagaaactggatgtgagagaaggt
gtaaagtctaaattttacctaaatctcctccagctatgtgcatctaacagcgagaagtta
ctggttttcagccagtatcttctgccccttaaatttctcgagagattgacttctaaaatg
aagggttacagaattggtatagagatgttcatgatcactggtgactcagatgcagagact
cgagaatcttacatggaaaagttcaatacctcagctgatgcgagggttttttttggctca
attaaagcatgtggtgaaggaatatcccttgtaggggcgtcacgcattataatattggat
gttcatttaaacccttctgtcacacgacaagcaattgggcgagcattcaggcctggccag
gtgaggaaggtttacacatataggttgatcgctagtggctccccagaggaagctgatcac
accacgtgcttcaggaaggagtccatagcaaagttgtggttcgaatgggacgaatttaat
ggtcgccaaaaccttgaaatggaaactgtcaatgtaaatgattgtggagacatgtttctt
gaaatggaacgattaaatgaagacgtgactgcagttttcaaaaggtaa
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