Primulina tabacum: 142542201
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Entry
142542201 CDS
T11246
Name
(RefSeq) putative pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142542201
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142542201
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142542201
NCBI-ProteinID:
XP_075504816
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Position
4:complement(1223630..1228338)
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AA seq
450 aa
AA seq
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MAMADSKKWISLLGLLLLVVLVGVVATVQKDGTLHLSSAVKKEQLPSSSNSTVEERLIKI
DEDALNEHEVDDPEEVARMVEMATRNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNRKR
LADCGIGFGRNAIGGRDGRFYIVTDSGDDDPVNPRPGTLRHAVIQNQPLWIVFKRDMVIT
LKQELIMNSFKTIDGRGVNVHIANGACLTIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSH
YGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLL
GHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTI
NSQGNRYLAPVNPFAKEVTKRVETAESQWKGWNWRSEGDLMLNGAYFTPSGAGASASYAR
ASSLGAKSSSMIGPITSGAGVLNCRRGHQC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcggattcgaagaaatggatttctctgttaggtctgctgctgctcgtggtt
ctagttggagttgtggccaccgttcagaaagatggaactcttcatctcagcagcgctgtg
aagaaagagcagctgccgagctcttcaaactctacagtggaggaaagattgataaaaatt
gatgaggatgcgctgaatgaacatgaggtggatgatccagaagaggttgcaaggatggtt
gaaatggccactagaaacagcacagagaggagaaagcttggatttttctcatgtggaact
ggtaatcctattgatgactgctggcgttgcgaccccaactggcaaaaaaaccgcaagaga
ctagccgactgtgggattggttttgggcgcaatgccatcggcggccgtgatggcagattc
tacattgtcaccgattctggagatgacgatccagttaaccccaggcctggcaccctacgc
cacgctgttatccaaaatcagcctctctggattgtgttcaaacgtgacatggtcataaca
ttgaagcaagaactcatcatgaacagcttcaagaccattgatggccgtggcgtcaacgtc
cacatcgctaacggggcgtgcctcacaatccaattcgtgaccaatgtcataatccatggc
cttcatatccatgactgcaaaccaacgggaaatgccatggtgagaagctcaccttctcat
tatggttggaggactatggctgatggagatgccatttcaatctttggttcgagtcatatc
tgggtcgatcacaactcgctctctaactgtgctgatggccttgtggatgctgtcatgggg
tctactgctattaccatttctaacaactatttcacccatcacaacgaggttatgctgttg
ggtcatagtgattcttatgttagagacaaacaaatgcaagtgactattgcctataatcac
tttggagaaggcctcattcaaagaatgcctaggtgcagacacggatatttccacgtcgtg
aataatgactatactcattgggagatgtatgctatcggtggaagtgctaacccaacaatc
aacagccagggcaacagatatcttgcgccagttaatccttttgccaaagaggtgactaag
agggttgaaacagcagaaagccaatggaagggttggaactggagatcagaaggcgacctc
atgttaaatggagcttattttactccatctggagctggagcttcagctagctacgctaga
gcttcaagcttgggtgctaagtcttcctccatgattggaccgattacttctggtgcaggt
gtccttaactgccgccgcggccaccagtgctaa
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