Primulina tabacum: 142542305
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Entry
142542305 CDS
T11246
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142542305
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
142542305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_14
NPHP3_N
NACHT
AAA_5
ATPase_2
Viral_helicase1
Cytidylate_kin
DUF815
AAA_30
AAA_28
TsaE
TIP49
RNA_helicase
AAA_2
RuvB_N
ABC_tran
AAA_11
AAA_33
AAA_7
AAA_17
Rad17
nSTAND1
AAA_24
KAP_NTPase
IstB_IS21
AAA_19
bpMoxR
NB-ARC
PduV-EutP
Mg_chelatase
SLFN-g3_helicase
AAA_3
SRPRB
nSTAND6
AAA_13
Motif
Other DBs
NCBI-GeneID:
142542305
NCBI-ProteinID:
XP_075504992
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Position
4:complement(2000569..2006864)
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AA seq
470 aa
AA seq
DB search
MTAAETSVPMDITMQNPAQCGVLEQDAAVTEPPVASSARPPDPPIFNEDKVLVSVEVLLK
PSSTARFDDVRSTVESMLEKRSMSYADGPIPVPVDNSFLVDNVQRICICDSDMWVEKNDI
LLFWQVRPVIHVFQLSEEGPCEELNNDGQHTSFNEWILPANEFDGLWESLIYESGLKQRL
LRYAASALLFTEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRLSSRYPQCQL
IEVNAHSLFSKWFSESGKLVAKLFSKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSE
PSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARFE
ILRSCLLELMRTGILSDSQVQDGDLLLQSFTSLREQLNSTTGATESAAPLNLSKQLLEVA
EACKGLSGRTLRKLPFLAHAALANPFTCGPDIFLRKMIETAKRECSERPD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagctgaaacgagtgttcccatggatatcaccatgcagaaccccgcccaatgt
ggcgttctcgaacaagacgccgccgttactgagccaccagttgcatcatctgctcggcct
cctgatccgccgatattcaacgaagataaagtccttgtttcagttgaagttttattgaaa
ccttccagtacagctcggtttgatgatgttaggtcaacagtcgaaagtatgctcgaaaag
agaagcatgagctatgctgatggtccaatcccggttccagtggataattcatttcttgta
gataatgttcaaaggatatgtatatgtgattcagacatgtgggtcgaaaagaacgatatt
ctactcttttggcaagtcagaccggtcatccatgtttttcagctcagtgaggaagggcct
tgcgaggaattaaataatgatggccaacatactagttttaatgaatggattcttcccgca
aatgaatttgatggtctgtgggaaagcttaatttatgaatctggcctgaagcaaaggtta
ctacgatatgcagcgagtgcattgctttttactgaaaagggtgtgaatccttttcttgtg
tcatggaaccgcattgttcttcttcatggacctccaggtacggggaagacatctctgtgt
aaagcattggcacaaaaactctccatacgcttaagctccagatacccacagtgccagttg
atcgaggttaatgcacattccttgttcagtaaatggttttctgaaagtggcaagctggtt
gcaaaacttttctctaagattcaagaaatggttgaagaagaaaacaatctcgtatttgtc
ttgattgatgaagttgaaagtttagctgctgctaggaaggctgctttgtctggatctgaa
ccttctgattccattcgggttgtcaacgctctcctgacccagatggacaagttgaagtcc
tcacccaatgtgataattctaactacctcaaatataactgctgctatagatatcgctttc
gtggatcgagctgatataaaggcatatgtgggacctccaactctccaagcacgctttgaa
attttaagatcttgcttgcttgaacttatgcggactggaatattatcagattcccaggtc
caggatggtgatctccttcttcagagttttactagtcttcgagagcagctaaattcgaca
acaggagcaacggagtccgcagccccattaaatttgtctaaacaattgcttgaagttgca
gaagcatgcaagggtttaagtggaagaacactcagaaaacttccatttttggcacacgcg
gcccttgcaaatccttttacctgtggaccagacatattcttgcggaagatgatagaaaca
gcaaaacgagaatgttctgagaggccggactga
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