KEGG   Primulina tabacum: 142542916
Entry
142542916         CDS       T11246                                 
Name
(RefSeq) protein SPA1-RELATED 2-like isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
ptab  Primulina tabacum
Pathway
ptab04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    142542916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptab04121]
    142542916
Ubiquitin system [BR:ptab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    142542916
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Pkinase WDR54 Beta-prop_NUP159_NUP214 Beta-prop_SCAP WD40_RFWD3
Other DBs
NCBI-GeneID: 142542916
NCBI-ProteinID: XP_075505934
LinkDB
Position
4:complement(7620533..7629609)
AA seq 1053 aa
MDEAIGDELVEPVSDTHIRNKEYDEVSLEPGSSSMFQSNEMLTPSTNDYPESARKLYTDI
LNAKDLDRIDSSDNAVASPRCVNGAGVMVKELILKNYGEKLTVVGTSNTKGRTQTRKSQW
QHLHHMAGESEYKEQSQATSSAWEDEDDSFFSQLLDQNKPKPNFDHNEVANNLPSNDDEV
ASGDTLNSLGGIRTKILSKSGFSEYFIKSTLGGKGVIHKAGACRGSIMESRIQDCPKPSA
AGFKNSVASLSPTVQPVSRTSHGISESSSGPSSNDNGDGINLREWLEAGQNKENKVGSLC
IFRQVLGLVDFLHYQGVSLQELRPSCFKLLGSSEIMYLGSFVCAKASANTADQVIHQPHH
NQNDKRPVHQDMQLLDNQAWKKRKISEGIKFIQRWSQFPSRSGNMSVFKEVSKVDGSDPL
DPGNCVDEEHNPKTEAKNQGNFFSDNVSNPSHPSQDSASCVLEEKWYTSPEEMGCTFASN
IYNLGVLLFELLGSFGTGRSHAAAMLDLRHRILPPSFLSENPREAGFCLWLLHPEPSLRP
TAREVLQSEFISGIQDSSGGELLSSIDEEDGESELLSFFLSSLSEQKQKDASNLVEQIHG
LETDIHEVEERGSKKLLILSSSAPESLTASGSEYYNPISKVFSKLTPPGDKGTRLMSNIR
KLDSAYFSMRSNIQMSDGNPAIHRDRELLKARENWCTMGREKGDGADRLGDFFDGFCKFA
RYNKFKVRGILRNGEFNSFTNVICSLSFDRDEDYLAAGLVSKKIKIFEFEALFNDSVDIH
YPVVEMANKSKLSCICWNSYIKNYIASTDYEGIVKLWDAGTGQSFSHFIEHSERVWSVDF
SHVNPMKLASGGDDRLVKLWSINEKNSLCTIRNHANVCCVQFSADSAHLLAFSSADYKTY
CYDLRKASVPWCILAGHEKTVSYAKFLDAGTLVSASTDNTLKIWDLNKTSSNCLSKDACV
LTLRGHTNEKNFVGLSAHDGYITCGSETNEVFAYYKSLSMPITSHKFGSFDSITGKETED
SNGQFVSSVCWRRKSNMVVAANSSGRIKLLQMV
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggatgaagcaattggtgatgagctggtcgaacctgttagcgacacacatattcgaaat
aaagagtatgacgaggtctcattggagcctggaagctccagcatgtttcaatcaaatgaa
atgttaactcccagtacgaatgattatcctgagagtgcaagaaagttgtatacagatatt
ctgaatgcaaaagacctagacagaattgattcttctgataatgcagtcgctagtcctcga
tgtgtcaatggtgcaggggttatggttaaagagttgattctgaaaaattatggagaaaag
ttgactgtagtgggtacttcgaatactaaaggaagaacacaaaccaggaaaagccagtgg
cagcatttgcatcatatggctggcgaatccgagtacaaagaacaaagtcaagcaacgtca
agtgcctgggaggatgaagacgacagtttcttttctcagcttctagatcaaaataaacca
aaaccaaactttgatcataatgaagtcgcgaacaatttaccaagtaatgacgatgaagtt
gcttctggagatacgttgaactctctgggaggcatccggacaaaaattttatctaaatct
ggattctctgaatacttcataaaaagtactttgggagggaagggtgtgatacataaagct
ggtgcttgcagaggatctattatggagtcccggatccaggattgtccaaagcctagtgct
gctggttttaaaaattccgttgcttcactaagcccgactgtgcaacctgtttcacgtact
tcacatggtatttctgagtcatcatctggtcccagttctaatgataatggtgatggaatc
aatttgagagagtggctagaagcaggccaaaacaaggaaaataaagttggtagcttgtgt
atatttagacaggttctgggtcttgtggattttttgcactaccagggagtttctttgcaa
gaattgaggccttcctgcttcaagttgttgggatcatctgagatcatgtatctagggtca
tttgtatgtgctaaggcctcagcaaacacagcagatcaagtgattcaccagccacatcat
aatcaaaatgacaagagacctgtacatcaagacatgcaattgttggacaaccaggcttgg
aagaagcgaaaaataagtgaaggtataaaatttattcaaaggtggagccaatttccatcc
agatctggcaatatgtctgtattcaaagaagtttccaaggtagatggttctgaccctctg
gatcctggaaattgtgtagatgaagagcacaaccccaaaacagaagctaaaaaccaggga
aatttttttagtgataatgtgtccaatccatctcatccatcacaggattctgcgagttgt
gtgttggaagagaagtggtacaccagtcccgaagagatgggctgcacatttgcgtcaaat
atctataacttgggtgttctactgtttgagttacttggctcgtttggtactggaagatct
catgctgctgcgatgcttgatttacggcataggattcttccgccgagtttcctttcagaa
aatcccagggaagctgggttctgtctctggctgcttcatcctgaaccttcattgcgacca
acagcaagggaagttctgcaatctgaatttataagtggaattcaggactcatctggaggt
gagttgttgtcttccattgatgaagaagacggggaatcagaattattgtcattttttctt
tcatccttaagtgagcaaaaacagaaggatgcatcaaatctggtggaacaaatccatggc
ttagaaactgacattcatgaggttgaggaacgaggatctaaaaagctactaattttatct
tcatcagcaccagagtcacttactgctagtggcagcgagtattataatccaatttcaaaa
gtgttctcaaagttgacccctccaggtgataaaggaacaaggttgatgagtaacatcagg
aaacttgatagtgcttacttttccatgagatctaacattcagatgtcagatggtaatccc
gccattcacagggatagagaactgttaaaagctcgggaaaactggtgcacaatggggagg
gagaaaggtgatggtgctgatcgtttaggtgatttctttgatggtttctgcaaatttgct
cgctataacaaattcaaagtgcgtgggattttgcggaatggagaatttaatagtttcact
aatgttatatgttctttgagttttgaccgggatgaggactacttagctgctggactggtg
tcaaagaagataaaaatttttgaatttgaagcgctatttaatgattcagtcgacattcat
tatccagttgttgagatggcaaacaaatcaaaacttagttgcatttgctggaatagctac
atcaaaaattatattgcttcgaccgattatgaaggcatagtcaagttatgggatgcagga
acaggtcagagtttttcacatttcattgaacatagtgaaagggtttggtctgttgatttc
tctcatgtgaatcctatgaaattagcgagtggtggtgatgatcgtctggtgaaactttgg
agcattaatgagaaaaacagtttatgcacgatcaggaaccatgcgaatgtgtgctgtgtg
caattctcagctgactcagctcatttattggcttttagctctgctgattataagacctat
tgttacgatctacgcaaggcttcagttccttggtgcatattggctggccatgagaaaact
gttagttatgctaaattcttggatgcaggaactcttgtttctgcatctacagacaacacc
ctaaaaatttgggatcttaataaaactagctccaattgtttatcaaaggatgcttgtgta
ttaactcttagaggacatactaacgagaagaactttgtgggactatcagctcatgatgga
tatattacatgtggttctgagacaaacgaggtattcgcctattacaaatctctgtcaatg
cccattacatcccacaaatttggttcctttgattccataactggtaaggagactgaagat
tcaaatggacagttcgtttccagcgtttgctggagaaggaaatcaaatatggtggttgct
gccaattcatctgggcgtatcaagctcttgcaaatggtgtag

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